Pseudomonas cannabina pv. alisalensis: JGS08_16100
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Entry
JGS08_16100 CDS
T07379
Name
(GenBank) sugar ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02010
ABC transporters
pcab02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JGS08_16100
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
JGS08_16100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_16100
Transporters [BR:
pcab02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
JGS08_16100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
TraO
Motif
Other DBs
NCBI-ProteinID:
QQN20155
LinkDB
All DBs
Position
complement(3579601..3580560)
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AA seq
319 aa
AA seq
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MKLPFAGRLLAVAMFAAVTAVMPLSAAVAQTPEKPKVALVMKSLANEFFLTMEDGAKAYQ
KEHANEFDLVSNGIKDESDTSAQIRIVEQMIVSRVDALVIAPADSKALVPVLKKATDAGI
KVVNIDNQLDPDVLKSKNLQIPFVGPDNRKGAELVGDYLAKQLKAGDEVGIIEGVSTTTN
AQQRTAGFKDAMDKAQMKVVSTQSGNWEIDKGNAVASAMLNEYPNLKALLAGNDSMALGA
VSAVRAAGKAGKVMVVGYDNINAIKPMLKDGRVLATADQYAAKQAVFGIEAALKAVKGEK
VDTNEKGVIETPVELVTKP
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgccatttgctggacgccttctcgctgtcgccatgtttgctgccgttacggca
gtcatgcccctctctgctgcagttgcccagaccccggaaaaacccaaagtcgcgctggtc
atgaaatcactggccaacgaattcttcctgaccatggaagatggcgccaaggcctatcag
aaagaacacgccaacgaattcgacctggtctccaacgggatcaaagacgaatccgacacc
tcggcgcagattcgtatcgtcgagcagatgatcgtgtccagagtcgatgcgctggtgatt
gcgcctgctgactcgaaagcgctggtgccggtgctcaagaaagccaccgacgcggggatc
aaggtcgtcaacatcgacaaccagctcgatcccgatgtgctcaaaagcaaaaatttgcaa
atcccgttcgtagggcctgacaaccgcaagggtgctgaactggtaggcgactatctggcc
aagcagctcaaggccggcgatgaagtgggcatcatcgaaggggtgtcgaccaccaccaac
gctcagcagcgcaccgccgggttcaaggacgccatggacaaagcgcaaatgaaggtcgtg
tccacgcagtccggcaactgggaaatcgataagggcaatgccgtggcgtcggcgatgctc
aatgaatacccgaacctgaaagcactgctggccggcaacgacagcatggcgctgggtgcc
gtttcggcagtgcgcgcggcgggcaaggccggcaaggtcatggtggtgggttacgacaac
atcaatgccatcaagccgatgctcaaagatggccgtgttctggccacggctgaccagtac
gcagccaaacaggcagtcttcggcattgaagctgcgctgaaagcggtcaagggtgaaaag
gtcgataccaacgaaaaaggcgttatcgaaacgccagtagaactcgttaccaaaccctga
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