Pseudomonas cannabina pv. alisalensis: JGS08_16385
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Entry
JGS08_16385 CDS
T07379
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_16385
Transporters [BR:
pcab02000
]
Other transporters
Pores ion channels [TC:
1
]
JGS08_16385
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
OprF
OmpA
OMP_b-brl
DUF748
TSP_3
Motif
Other DBs
NCBI-ProteinID:
QQN20209
LinkDB
All DBs
Position
complement(3642057..3643091)
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AA seq
344 aa
AA seq
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MKLKNTLGLAIGTIVAATSFGALAQGQGAVEIEGFAKKEYYDSARNFKNDGNLFGGSVGY
FLTDDVELRLGYDEVHNVRSDSGKNIKGANTALDALYHFNNPGDMLRPYLSAGFSDQSIG
QDARSGRNGSTFANVGGGAKLYFTDNFYARAGVEAQYNIDQGDTEWAPSVGIGVNFGGGS
KKVEAAPAPVAEVCSDSDNDGVCDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDF
NKSVVKPNSYGDIKNLADFMQQYPSTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLVN
QYGVGAGRVNSVGYGESRPVADNATEAGRAVNRRVEAQVEAQAK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaaaacaccttgggcttggccattggtactattgttgccgcaacatcgttc
ggcgctctggctcaaggccaaggcgcagtcgaaatcgaaggcttcgccaagaaagagtat
tacgacagcgctcgtaatttcaaaaatgacggcaacctgttcggcggctccgttggctac
ttcctgaccgacgacgttgaactgcgtctgggctacgacgaagttcacaacgtccgtagc
gacagtggcaagaacatcaagggcgcgaacaccgctctggacgctctgtaccacttcaac
aacccaggcgacatgctgcgtccgtacctgtctgctggtttctccgatcaaagcatcggt
caagacgctcgcagcggtcgtaacggttcgaccttcgccaacgtcggcggcggcgccaag
ctgtacttcactgacaacttctatgcccgtgcaggcgttgaagctcagtacaacatcgac
caaggtgacaccgagtgggcgccaagcgtcggtatcggcgtaaacttcggtggcggcagc
aagaaagtagaagccgcaccggctccagtagctgaagtgtgctccgacagcgacaacgac
ggcgtgtgcgacaacgtcgacaagtgcccagacaccccagccaacgtaactgttgacgct
gatggctgcccggcagttgctgaagtggttcgtgttgagctggacgtcaagttcgacttc
aacaagtcggtcgtcaagcctaacagctacggcgacatcaagaaccttgctgacttcatg
cagcagtacccatccaccaccaccactgttgaaggtcacactgactccgtcggtcctgac
gcttacaaccaaaaactgtccgagcgtcgtgcaaacgccgttaaacaggttctggttaac
cagtacggtgttggcgctggccgcgtaaactcggttggttacggcgaatcccgcccagtt
gctgacaacgcaactgaagctggccgcgcagttaaccgtcgcgtagaagcacaagtagaa
gctcaagctaagtaa
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