Pseudomonas cannabina pv. alisalensis: JGS08_16430
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Entry
JGS08_16430 CDS
T07379
Symbol
prpF
Name
(GenBank) 2-methylaconitate cis-trans isomerase PrpF
KO
K09788
2-methylaconitate isomerase [EC:5.3.3.-]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00640
Propanoate metabolism
pcab01100
Metabolic pathways
pcab01120
Microbial metabolism in diverse environments
pcab01200
Carbon metabolism
Module
pcab_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
JGS08_16430 (prpF)
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Motif
Pfam:
PrpF
Motif
Other DBs
NCBI-ProteinID:
QQN20218
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Position
complement(3651188..3652378)
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AA seq
396 aa
AA seq
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MTHSPQIRIPATYMRGGTSKGVFFRLTDLPAATQTPGPARDALLLRIIGSPDPYEKQIDG
MGGATSSTSKTVIVSRSSKPDHDVDYLFGQVSIDKPFIDWSGNCGNLSAAVGSFAITSEL
IDASRVPQNGIAVVRIWQANIGKTIIAHVPICNGEVQETGDFELDGVTFPAAEVQLEFLD
PAADEEGAGGSMFPTGNLVDDLHVPGLGTLKATLINAGIPTIFVNAADIGYTGTELQGDI
NADPLALARLETLRAYGAVRMGLIGSIDEAATRQHTPKVAFVAAPADYVSSSGKPVAAQD
IDLLVRAVSMGKLHHAMMGTAAVAIGTAAAIPGTLVSLAAGGEPRSAVRFGHPSGTLRVG
AQALQKGGEWTVTKAIMSRSARTLMEGWVRVPPLGD
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgactcactcaccgcagatccgaatccccgccacctacatgcgcgggggcaccagtaag
ggggttttcttcaggctgactgatctgccggcagccacgcagacgcccggcccggcaagg
gatgcgctgctcttgcgaatcatcggcagccccgacccctacgaaaagcagatcgatggc
atgggcggggcgacgtcgagcaccagcaagacggtgatcgtgtcgcgcagcagcaagccc
gatcacgatgtcgattacctgttcggtcaggtgtcgatcgacaagccgtttatcgactgg
agcggcaattgcggcaatctgtcggcggccgtgggctcgttcgccatcaccagtgagctg
atcgacgccagccgcgtgccacagaacggcattgctgtcgtgcgcatctggcaggctaac
atcggcaagaccatcatcgcccatgtgccaatctgcaacggcgaggtgcaggaaaccggt
gatttcgagctggatggcgtgactttccccgcagcggaggtgcagctcgagtttcttgac
cctgcggcggatgaagagggcgccggtggctcgatgtttcccaccggcaacctggtggat
gacctgcacgtgcccggtctcggcacattgaaagccaccctgatcaacgctggcatcccg
accatcttcgtcaacgccgctgatatcggctacaccggcaccgagttgcagggtgatatc
aacgctgatccgctcgcacttgcccggctggagacccttcgcgcctatggtgccgtgcgc
atggggctgatcggcagcatcgatgaagctgccacgcgccagcacacgcccaaggtcgcc
tttgtcgccgcgcctgccgattatgtttcctccagtggcaagcctgtcgccgcgcaggat
atcgacctgctggtgcgcgccgtatcgatgggcaaactgcatcacgccatgatgggcacc
gctgccgtggcgataggtactgcggcggcgatccctggaacgctggtcagtctggccgcc
ggtggcgagccgcgcagtgcggtgcgcttcggtcacccgtccggcacgctgcgggtcggg
gctcaggctcttcagaagggcggcgaatggacagtcaccaaggcgatcatgagccgcagc
gcgcgaaccctgatggaaggatgggtgcgtgtgccgccactgggcgactga
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