Pseudomonas cannabina pv. alisalensis: JGS08_16445
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Entry
JGS08_16445 CDS
T07379
Symbol
prpB
Name
(GenBank) methylisocitrate lyase
KO
K03417
methylisocitrate lyase [EC:
4.1.3.30
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00640
Propanoate metabolism
pcab01100
Metabolic pathways
pcab01120
Microbial metabolism in diverse environments
pcab01200
Carbon metabolism
Module
pcab_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
JGS08_16445 (prpB)
Enzymes [BR:
pcab01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.30 methylisocitrate lyase
JGS08_16445 (prpB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP_mutase
ICL
DUF4936
Motif
Other DBs
NCBI-ProteinID:
QQN20221
LinkDB
All DBs
Position
complement(3656516..3657409)
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AA seq
297 aa
AA seq
DB search
MSSNNRTPGQRFRDAVASEQPLQVVGAINANHALLAKRAGFKAIYLSGGGVAAGSLGIPD
LGITGLEDVLIDVRRITDVCDLPLLVDVDTGFGSSAFNVARTVRSMIKAGAAAIHIEDQV
GAKRCGHRPNKEIVSQQEMVDRIKAAVDARTDDSFVIMARTDALAVEGLESALERAAACI
EAGADMVFPEAITELAMYKQFANRAGVPILANITEFGATPLFTVDELREADVSLVLYPLS
AFRAMNKAAENVYGAIRRDGSQKNVIDTMQTRMELYDAIDYHTFEQKLDALFAQKKG
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgagttccaacaaccgtactcccggccagcgttttcgcgatgcagtcgccagcgagcag
ccgttgcaagtggttggcgcgatcaatgccaatcacgcgctgctcgccaaacgcgccggg
ttcaaggctatttacctgtcgggtggcggggtggcggcgggttcgctggggattccggat
ctggggatcaccggtctggaggatgtgctgatcgatgtgcggcgcatcaccgatgtgtgt
gatctgccgctgctggtggatgtcgacacagggttcggttcgtcggccttcaacgtggcg
cgcaccgtgcgttcgatgatcaaggccggcgctgcggcgattcatattgaagaccaggtc
ggtgccaagcgctgcggccatcgcccgaacaaggaaatcgtttcgcagcaggaaatggtc
gaccgcatcaaagcggctgtcgatgcgcgaaccgatgacagcttcgtgatcatggcgcgc
accgatgcgctggcggtcgaaggcctggaatcggcgctggagcgcgctgcggcgtgtatc
gaagcgggcgccgacatggtctttccggaagcgatcaccgaactggcgatgtacaagcag
tttgccaaccgcgcgggcgtgccgattctggccaatatcacggaatttggtgcgacgccg
ctgtttaccgtggatgagctgcgcgaggccgatgtgtcgctggtgctctatcctctttct
gctttccgggccatgaacaaggccgcggaaaacgtctacggcgcgatccgtcgcgacggc
agccagaaaaacgtgatcgacaccatgcagacccgcatggagctgtacgacgccatcgat
taccacaccttcgagcagaaactggacgcgttgtttgcgcagaagaagggctga
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