Pseudomonas cannabina pv. alisalensis: JGS08_16520
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Entry
JGS08_16520 CDS
T07379
Name
(GenBank) L,D-transpeptidase family protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcab01002
]
JGS08_16520
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcab01011
]
JGS08_16520
Peptidases and inhibitors [BR:
pcab01002
]
Cysteine peptidases
Family C82
JGS08_16520
Peptidoglycan biosynthesis and degradation proteins [BR:
pcab01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
JGS08_16520
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
Motif
Other DBs
NCBI-ProteinID:
QQN20234
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All DBs
Position
complement(3671029..3671994)
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AA seq
321 aa
AA seq
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MLSRIPAVTRCLSLAALCAASSVHALEFPLPPPGEDIVGEVQVIKARYEDTFADLGTKYD
LGYLEMIAANPGVDPWLPGAGKDIVLPTRFILPPGPREGIVINLAEYRMYYYPKGQNVVH
TYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASIKAEHAADGDPLPDVVPAGPDNPLGP
FKFGLGMSGYLIHGSNKKFGIGMRTSHGCFRMYNDNVLELADMAPVGTTVRIISEPYKFG
ISGGKVYLEAHTPVDDLGNPSVVDKHTAVINALLKRDDLANNLRMNWDRVRDVVAAEDGM
PVEIAVPGVASASAEEPVIFQ
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgcgcattccagccgttacccgctgtctgtcacttgctgctctctgcgcggcg
agctccgtccatgcgcttgagtttccattgccgccacccggtgaggacatcgtcggtgaa
gtgcaggtgatcaaggccaggtatgaagataccttcgccgacctgggcacgaaatacgat
ctgggctatctggaaatgatcgccgccaatccgggtgtagacccgtggttgccgggcgcg
ggcaaggacattgtgctgccgacccgtttcatcctgccgccgggtccgcgcgaaggtatc
gtcatcaacctggccgaataccgcatgtattactaccccaaagggcagaatgtggtgcac
acctatccgctgggtgtcggtcgtgaaggctggggctcgcccattggcgtgaccaaagtg
accgccaagacgccaaacccgacctggacgccacctgcttccatcaaggccgagcatgct
gctgacggcgatccgctgcccgacgtggtacctgccggcccggacaacccgctggggccg
ttcaaattcggtctggggatgtccggctacctgatccacggctcgaacaagaaattcggc
atcggcatgcgcaccagccacggctgcttccgcatgtacaacgacaacgtactggaactg
gccgacatggccccggtcggcaccaccgtgcgcatcatcagcgaaccctacaaattcggc
atcagtggcggcaaggtctaccttgaagcgcacacgccggtcgacgacctgggcaatcca
tcggtggtcgacaaacacaccgccgtcatcaacgccctgctcaaacgcgacgaccttgcc
aacaacctgcgcatgaactgggatcgagtccgtgacgtggtagcggccgaagacggcatg
ccggtcgagatcgcagtgccgggggttgcttctgcgagcgcggaagaaccggtgattttt
cagtag
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