Pseudomonas cannabina pv. alisalensis: JGS08_16820
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Entry
JGS08_16820 CDS
T07379
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00010
Glycolysis / Gluconeogenesis
pcab00020
Citrate cycle (TCA cycle)
pcab00260
Glycine, serine and threonine metabolism
pcab00280
Valine, leucine and isoleucine degradation
pcab00310
Lysine degradation
pcab00380
Tryptophan metabolism
pcab00620
Pyruvate metabolism
pcab00630
Glyoxylate and dicarboxylate metabolism
pcab00640
Propanoate metabolism
pcab00670
One carbon pool by folate
pcab00785
Lipoic acid metabolism
pcab01100
Metabolic pathways
pcab01110
Biosynthesis of secondary metabolites
pcab01120
Microbial metabolism in diverse environments
pcab01200
Carbon metabolism
pcab01210
2-Oxocarboxylic acid metabolism
pcab01240
Biosynthesis of cofactors
Module
pcab_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pcab_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pcab_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pcab_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
JGS08_16820 (lpdA)
00020 Citrate cycle (TCA cycle)
JGS08_16820 (lpdA)
00620 Pyruvate metabolism
JGS08_16820 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
JGS08_16820 (lpdA)
00640 Propanoate metabolism
JGS08_16820 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JGS08_16820 (lpdA)
00280 Valine, leucine and isoleucine degradation
JGS08_16820 (lpdA)
00310 Lysine degradation
JGS08_16820 (lpdA)
00380 Tryptophan metabolism
JGS08_16820 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JGS08_16820 (lpdA)
00670 One carbon pool by folate
JGS08_16820 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcab04147
]
JGS08_16820 (lpdA)
Enzymes [BR:
pcab01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
JGS08_16820 (lpdA)
Exosome [BR:
pcab04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
JGS08_16820 (lpdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
FAD_binding_3
GIDA
HI0933_like
FAD_oxidored
AlaDh_PNT_C
NAD_binding_8
3HCDH_N
Thi4
DAO
2-Hacid_dh_C
Amino_oxidase
UDPG_MGDP_dh_N
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
QQN20291
LinkDB
All DBs
Position
complement(3751569..3753005)
Genome browser
AA seq
478 aa
AA seq
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MSQKFDVVVIGAGPGGYVAAIKAAQLGLKTACIEKYQDKEGKLALGGTCLNVGCIPSKAL
LDSSWKFYEAKNGFSVHGISTSDVTMDVPAMIGRKSTIVKGLTGGVSSLFKANGVTTLQG
HGKLLAGKKVELTAADGTVEIIEADHVILASGSRPIDIPPAPVDQKVIVDSTGALEFQQV
PQRLGVIGAGVIGLELGSVWARLGAQVTVLEALDKFIPAADEAVSKEALKTFTKQGLDIK
LGARVTGSKVNGEEVVVSYTDAAGEQSITFDRLIVAVGRRPVTTDLLAADSGVDLDERGF
IYVDDYCTTSVPGVYAIGDVVRGLMLAHKASEEGIMVVERIKGHKAQMNYNLIPSVIYTH
PEIAWVGKTEQTLKAEGVEVNVGTFPFAASGRAMAANDTGGFVKIIADAKTDRVLGVHVI
GPSAAELVQQGAIAMEFGSSAEDIGMMVFSHPTLSEALHEAALAVNGGAIHIQNRKKR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaaattcgacgtggtagtgattggcgcaggccctggcggctatgttgccgcc
atcaaggctgcgcaacttggtctcaagactgcctgcatcgagaaatatcaggacaaggag
ggcaaactggccctcggcggtacctgcctgaacgtcggttgcattccttccaaggcactg
ctcgacagctcgtggaaattctacgaagccaagaacggcttcagcgtgcatggcatttcg
acgtctgacgtcaccatggacgtaccggcaatgatcggccgcaagtcgaccatcgtcaaa
ggcctgaccggcggtgtttccagcctgttcaaagccaacggcgtgaccactctgcagggc
cacggcaaactgctggccggcaagaaagtcgaactgacggctgccgacggcactgttgaa
atcatcgaagcggaccacgtgatcctggcatcgggttcgcgtccgatcgacattccaccg
gctccggtcgatcagaaagtcatcgtcgattccaccggtgcactggaattccagcaggtt
ccacagcgtctgggcgtgatcggcgctggcgtgatcggtctggaactgggttcggtctgg
gctcgcctgggcgctcaggtcaccgttctggaagcactggacaagttcatcccggccgct
gacgaagccgtttccaaggaagcgctgaaaaccttcaccaagcagggcctggacatcaag
ctcggcgctcgcgtgaccggttccaaggttaacggcgaagaagtggttgtcagctacacc
gacgctgccggcgagcagtcgatcacttttgatcgcctgatcgttgccgttggccgtcgc
ccggtgaccaccgacctgttggctgctgacagcggcgtcgatctggacgagcgcggcttc
atctatgtcgatgattactgcaccaccagcgtaccgggcgtttacgccatcggtgacgtg
gtgcgtggcctgatgctggcccacaaggcgtcggaagaaggcatcatggtggtcgagcgc
atcaagggccacaaggctcagatgaactacaacctgatcccgtcggttatctacacccac
ccggaaattgcctgggttggcaagactgaacagaccctcaaggccgaaggcgttgaagtc
aatgtcggtacgttcccgttcgcagccagtggccgtgccatggcagccaacgacaccggt
ggtttcgtcaagatcattgccgatgccaagaccgaccgcgttctgggtgttcacgttatt
ggcccgagcgctgccgaactggtacagcagggcgccatcgcgatggaattcggcagcagt
gcagaggacatcggcatgatggtcttctcgcacccgacgctgtccgaagcgctgcacgaa
gcggcactggctgtgaatggcggcgccatccatattcagaatcgcaagaaacgctaa
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