Pseudomonas cannabina pv. alisalensis: JGS08_16835
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Entry
JGS08_16835 CDS
T07379
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00020
Citrate cycle (TCA cycle)
pcab00190
Oxidative phosphorylation
pcab00650
Butanoate metabolism
pcab00720
Other carbon fixation pathways
pcab01100
Metabolic pathways
pcab01110
Biosynthesis of secondary metabolites
pcab01120
Microbial metabolism in diverse environments
pcab01200
Carbon metabolism
Module
pcab_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pcab_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pcab_M00149
Succinate dehydrogenase, prokaryotes
pcab_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JGS08_16835
00650 Butanoate metabolism
JGS08_16835
09102 Energy metabolism
00190 Oxidative phosphorylation
JGS08_16835
00720 Other carbon fixation pathways
JGS08_16835
Enzymes [BR:
pcab01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
JGS08_16835
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_17
Fer4_10
Fer4_9
Fer4_7
Fer4_18
Fer4_2
Fer4
Motif
Other DBs
NCBI-ProteinID:
QQN20294
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Position
complement(3757532..3758236)
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AA seq
234 aa
AA seq
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MLQVSVYRYNPEQDAAPFMQEFQVDTGGKDLMVLDVLALVKEQDQGFSYRRSCREGVCGS
DGMNINGKNGLACITPLSAVVAKGKLIVRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQN
DTPAPAIERLQTPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLAD
SRDTRTSERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQNGV
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaagtcagtgtttatcgttacaaccccgagcaggacgctgcgccgttcatgcag
gagtttcaggtcgataccggcggcaaggacctgatggtgctggacgtgctggccctggtc
aaagaacaggatcaagggttctcgtaccgtcgctcatgccgtgaaggtgtgtgcggttcc
gatggcatgaacatcaacggcaagaacggcctggcctgcatcacgccgctgtctgccgtg
gttgccaagggcaagctgatcgtacgtccgttgccgggcttgccagtcattcgtgacctg
gtcgtcgatatgagcatcttctacaagcagtacgagaaggtgaagccgttcctgcagaat
gacacgccggccccggccatcgaacgtctgcaaacgccggaagagcgcgaaaagctcgac
ggtctgtacgagtgcatcctgtgcgcttgctgctcgacttcctgcccgtccttctggtgg
aaccccgacaagttcctgggcccggctgctctgctgcaagcctatcgttttctggctgac
agccgtgacacccgcaccagtgaacgtctggcttcgctcgacgatccgttcagcgtattc
cgctgccgcggcatcatgaactgcgtcaacgtttgcccgaaaggccttaacccaaccaag
gctatcggtcacgtgcgcaacatgttgttgcaaaacggcgtctga
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