Pseudomonas cannabina pv. alisalensis: JGS08_16930
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Entry
JGS08_16930 CDS
T07379
Symbol
dgoD
Name
(GenBank) galactonate dehydratase
KO
K01684
galactonate dehydratase [EC:
4.2.1.6
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00052
Galactose metabolism
pcab01100
Metabolic pathways
pcab01120
Microbial metabolism in diverse environments
Module
pcab_M00552
D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
JGS08_16930 (dgoD)
Enzymes [BR:
pcab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.6 galactonate dehydratase
JGS08_16930 (dgoD)
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Motif
Pfam:
MR_MLE_C
MR_MLE_N
Amidohydro_1
Motif
Other DBs
NCBI-ProteinID:
QQN20313
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Position
complement(3776606..3777754)
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AA seq
382 aa
AA seq
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MKITKLTTFIVPPRWCFLKVETDEGVVGWGEPVVEGRAHTVAAAVEELSDYLIGKDPRNI
EDIWTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKALGVSVSDLLGGQVRDKIRVYSWI
GGDRPADTARAAKEAVERGFTAVKMNGTEELQFLDTFDKVDLALANVAAVRDAVGPNVGI
GVDFHGRVHKPMAKVLMKELDAYKLMFIEEPVLSENYEALKELAPLTSTPIALGERLFSR
WDFKRVLSEGYVDIIQPDASHAGGITETRKIANMAEAYDVALALHCPLGPIALAACLQLD
AVCYNAFIQEQSLGIHYNESNDLLDYIKHPEVFDYDKGMVKIPNGPGLGIEINEEYVIER
AAIGHRWRNPIWRHADGSFAEW
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaccaaactcaccacgttcatcgttccgccgcgctggtgcttcctcaaggtc
gagactgacgagggcgttgtcggctggggcgagccggtggtcgaaggccgcgcgcatacc
gtggccgctgccgtggaagagctgtccgattacctgatcggcaaggacccgcgcaacatc
gaagacatctggaccgtgctgtatcgcggcggcttctaccgcggcggcgcgattcacatg
agtgcactggccggtatcgatcaggcgttgtgggacatcaagggcaaggcgctgggtgtt
tcggtgagtgacctgctgggtggtcaggtgcgtgacaagattcgtgtgtactcgtggatc
ggcggtgaccgtcctgccgacacggcgcgggcggccaaagaggcggtcgagcgcggtttt
acggcggtgaaaatgaacggcaccgaggagctgcaatttctcgatacttttgacaaggtc
gatctggcgctggccaacgtcgctgctgtgcgtgacgcggtggggccgaatgtcggcatc
ggcgtggacttccacggccgtgttcacaagccgatggccaaagtgctgatgaaagagctg
gacgcgtacaagctgatgttcatcgaagaaccggtgctcagcgaaaactacgaggcgctg
aaagaactggcaccgctgaccagcacgccgattgccttgggtgaacgactgttctcgcgc
tgggacttcaagcgcgtgctgagcgaaggttacgtcgacatcatccagccggatgcgtcg
catgcgggcggcatcaccgaaacccgcaagatcgccaacatggccgaagcttacgacgtc
gcgctggcgctgcactgcccgctggggccgattgcgctggcggcgtgcctgcaactggac
gcggtttgttacaacgccttcatccaggaacaaagcctgggcattcactacaacgaaagc
aacgacctgctggattacatcaagcatccggaagtgttcgactacgacaaaggcatggtc
aagatccccaacggacccggccttggcatcgaaatcaacgaagaatacgtcatcgaacgc
gccgccatcggccaccgctggcgcaacccgatctggcgtcatgcggatggcagttttgcg
gagtggtag
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