Pseudomonas cannabina pv. alisalensis: JGS08_17040
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Entry
JGS08_17040 CDS
T07379
Name
(GenBank) MacB family efflux pump subunit
KO
K05685
macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JGS08_17040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_17040
Transporters [BR:
pcab02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
JGS08_17040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MacB_PCD
ABC_tran
FtsX
SMC_N
AAA_29
ABC2_membrane_3
AAA_21
AAA_16
nSTAND1
MMR_HSR1
RsgA_GTPase
AAA_25
AAA_22
AAA_28
DUF87
DO-GTPase2
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QQN20331
LinkDB
All DBs
Position
3800930..3802903
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AA seq
657 aa
AA seq
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MHTPLIDLRGIRKSYGGGDSPRVNVLRGIDLSIHAGEFVAIVGASGSGKSTLMNILGCLD
RPTSGDYLFAGENVAELGSDELAWLRREAFGFVFQGYHLIPSGSAQENVEMPAIYAGTPA
AERHARAAALLDRLGLASRTGNRPHQLSGGQQQRVSIARALMNGGHIILADEPTGALDSH
SGAEVMTLLDELASQGHVVILITHDREVAARANRVIEISDGLVISDAARDVSEVQRSANP
AALQAVDLRKRLSEGSGSHGAWKGELLDAIQAAWRVMWINRFRTALTLLGIVIGVASVVV
MLAVGEGSKRQVMAQMSSFGSNIIYLNGKAPNPRAPKGVITLEKVAALGELPEVKMIMPV
NGGQAGVRFGNVDHSSYVGGNDTHFPAIFNWPVVEGSYFSEADEQSAAAVAVIGYKVRQK
LFGDRIDPIGQYILIENVPFQVVGVLQEKGATSGDLDSDNRIAIPYSSASIRLFGSQDPE
YITIATRDANNVRQAETAIRNLLQRLHNGKQDYELTNNAAMIQAEARTQNTLSLMLGSIA
AISLLVGGIGVMNIMLMTVRERTREIGIRMATGARQRDILRQFLTEAVMLSVVGGLAGIV
LALAMGAALLASKVAVAFTLSAVIGAFACALVTGVIFGFMPARKAARLDPVAALTSE
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgcacacgccgctgatcgacctgcggggcatccgcaaatcctacggcggtggcgacagc
ccgcgggtcaacgtgctgcgcggcatcgatctgtcgattcatgccggtgagttcgtggca
attgtcggcgcctccggctccggcaaatcgacgctgatgaacatcctcggctgcctggac
cgtccgacctcgggtgactacctgttcgccggggaaaacgttgccgaactgggcagcgac
gaactggcctggctgcgtcgcgaggcgttcggtttcgtgtttcagggctaccacctgatc
ccgtccggttcagcgcaggagaacgtcgagatgcccgccatctacgccggtacgcccgcc
gcagagcgccatgcccgagccgccgccctcctcgaccgcctgggcctggcctcacgcacc
ggcaaccggccgcatcaactctccggcggccagcagcaacgggtgtccatcgcccgcgcc
ttgatgaacggcggacacatcattcttgccgacgaacccaccggcgcgctggacagccac
agcggtgccgaggtcatgaccctgctggacgaactggccagccaggggcatgtggtgatt
ctgattacccacgatcgggaagtcgccgcgcgtgccaatcgggtcatcgagatcagcgac
ggtctagtgatcagcgatgccgcccgggatgtttccgaggtgcagcgctcagccaatccg
gccgccttgcaggccgtcgatctgcgcaagcgcctgagcgagggcagtggcagtcacggt
gcctggaaaggcgagctgctcgacgcgattcaggcggcgtggcgggtcatgtggatcaac
cgcttccgtaccgcgctgaccttattgggcatcgttatcggcgtcgcgtcggtggtggtc
atgctcgcggtcggtgaaggcagcaagcgccaggtcatggcgcagatgtcttcgtttggc
tccaacatcatttatctgaacggcaaggcacctaacccgcgcgcgcccaagggtgtcatc
accctggaaaaagtcgccgcgctgggcgagttgcccgaagtgaaaatgatcatgccggtc
aacggcggacaggccggagtgcgcttcggcaatgtcgatcactccagctacgtcggcggc
aacgacacgcactttccggcgatcttcaactggccggtcgtggaaggcagttacttcagt
gaggccgacgaacagagcgcagccgccgtggccgtgattggttacaaagtccggcagaag
ctgttcggtgatcgcatcgaccctatcggtcaatacatcctcatcgagaacgtgccgttt
caggtggtcggcgtgcttcaggaaaaaggcgcgacctcgggcgacctggacagcgacaac
cgcatcgccattccgtattcgtcggccagcatccgcctgttcggttcgcaggacccggag
tacatcaccatcgctacccgcgatgccaataacgtcaggcaggccgaaacagcgattcgc
aacctgctgcaacgcctgcacaacggcaagcaggattacgagctgaccaacaacgccgcg
atgatccaggccgaagcgcgcacccagaacaccctgtcgctgatgctcggctcgattgct
gccatctcgctgctggtcggcggcatcggggtgatgaacatcatgctcatgaccgtgcgc
gaacgcacccgcgagatcggcattcgcatggccaccggggcgcggcagcgcgacattctg
cgccagtttctcaccgaagcggtgatgctctcggtggtcggcgggctggccggtatcgtg
ctggcgctggcgatgggcgcggccttgctggcgagcaaggtggcggtggccttcaccctg
tctgcggtgatcggtgcctttgcctgtgcccttgtcaccggcgtgattttcggcttcatg
ccggcccgcaaagctgcccggcttgacccggtggcggcccttaccagtgaatga
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