Pseudomonas cannabina pv. alisalensis: JGS08_17995
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Entry
JGS08_17995 CDS
T07379
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02020
Two-component system
pcab02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JGS08_17995
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JGS08_17995
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pcab02022
]
JGS08_17995
02035 Bacterial motility proteins [BR:
pcab02035
]
JGS08_17995
Two-component system [BR:
pcab02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
JGS08_17995
Bacterial motility proteins [BR:
pcab02035
]
Flagellar system
Flagellar assembly proteins
Others
JGS08_17995
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
FleQ
AAA
MCM
HTH_30
MerR
HTH_20
AAA_3
AAA_2
AAA_19
HTH_23
HTH_24
nSTAND3
Sigma70_r4_2
HTH_11
RsiG
HTH_28
AAA_22
ATPase
HTH_1
AAA_7
HTH_17
nSTAND6
HTH_Mga
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QQN24748
LinkDB
All DBs
Position
complement(4032874..4034280)
Genome browser
AA seq
468 aa
AA seq
DB search
MSIKVLLVEDDRSLREALGETLELAGYGYQAVGSAEEALVAADAQPFSLVISDVNMPGMD
GHQLLSLLRSRHPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALIALVARHALG
RLGPADSEGPIAVEPASIQLLNLASRVAKSDSTVLISGESGTGKEVLARFIHQHSPRADK
PFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQAEGGTILLDEISEMPMALQA
KLLRVLQEREVERVGARKPIILDIRVVATTNRDLAGEVAAGRFREDLFYRLSVFPLAWQA
LRQRTADILPLAERLLAKHVNKMKHAPVRLSAEAQQCLISYAWPGNVRELDNAVQRALIL
QQGGVIQAQDFCLAGAVANVAPAATVTAAPALPVISVADHSGGAESVGALGDDLKRREFQ
MIIDTLRAERGRRKEAAERLGISPRTLRYKLAQMRDAGMDVEGYLFAT
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcaaggtgttgctggtcgaggacgaccgttcgctgcgcgaagcactgggggaa
acccttgagctggcaggttacggctatcaggcggtcggttctgccgaagaagcgctggtc
gcggccgatgcgcagcctttcagtctggtgatcagtgacgtcaacatgccgggcatggac
ggtcatcagttgttgagcctgctgcgcagtcggcacccgcagttaccggtgttgctgatg
accgcgcacggtgctgtcgagcgagcggtggacgcgatgcgtcagggtgcggcggattat
ctggtcaagcccttcgagcccaaggcgctgatcgcactggtcgcccggcatgcgctgggc
cgtctcgggcctgcggacagcgaggggccgattgcggtcgagcccgccagcatccagttg
ctgaacctcgccagccgtgtggcaaaaagtgattccacggtgctgatctccggcgagtcc
gggaccggcaaggaagtgctggcgcgattcattcaccagcactcaccgcgcgctgataaa
ccctttatcgcgatcaattgcgcggcgatcccggacaacatgctcgaagctaccttgttc
ggtcatgagaagggttcgtttaccggcgccatcgcggcgcaggcgggcaaattcgagcag
gctgaaggcggcacgattctgctcgacgaaatctccgaaatgcccatggcgcttcaggcc
aaactgctgcgcgtgttgcaggagcgcgaggtcgagcgtgttggcgcgcgcaaaccgatc
attctggacatacgtgtcgtggccaccaccaaccgcgatctggcgggcgaagtggcggcg
gggcgctttcgtgaggatctgttttatcgcctgtcggtgtttccgctggcgtggcaggcc
ttgcgtcaaaggactgccgatattctgccgttggccgagcgcttgctggccaagcacgtc
aataaaatgaagcacgcgccggtgcgtttatctgccgaggcgcagcagtgtctgatcagc
tacgcctggcctggcaatgtgcgcgagctggacaacgccgtgcagcgcgcgttgattctg
cagcagggcggggtgattcaggcgcaggatttctgccttgccggcgcggtcgccaatgtg
gcgcctgcggcaacggtaacggcggcgccagcactgcctgtcatatcggtcgcggatcat
tccggcggtgcagagtccgtcggcgcactcggcgatgatctgaagcgacgggagtttcag
atgatcatcgacacgttgcgcgccgagcgcgggcggcgcaaagaagctgccgaaaggttg
ggtatcagcccgcgtacattgcgctacaaactggcccagatgcgcgacgccgggatggat
gtggaaggctatttgttcgccacctga
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