Pseudomonas cannabina pv. alisalensis: JGS08_18005
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Entry
JGS08_18005 CDS
T07379
Symbol
fleQ
Name
(GenBank) transcriptional regulator FleQ
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02020
Two-component system
pcab02025
Biofilm formation - Pseudomonas aeruginosa
pcab02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JGS08_18005 (fleQ)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
JGS08_18005 (fleQ)
09142 Cell motility
02040 Flagellar assembly
JGS08_18005 (fleQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcab03000
]
JGS08_18005 (fleQ)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pcab02035
]
JGS08_18005 (fleQ)
Transcription factors [BR:
pcab03000
]
Prokaryotic type
Helix-turn-helix
Other families
JGS08_18005 (fleQ)
Bacterial motility proteins [BR:
pcab02035
]
Flagellar system
Flagellar assembly proteins
Others
JGS08_18005 (fleQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_7
nSTAND3
AAA_22
AAA
bpMoxR
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QQN20505
LinkDB
All DBs
Position
complement(4035617..4037092)
Genome browser
AA seq
491 aa
AA seq
DB search
MWREIKILLIDDDSQRRRDLAVILNFLGEENLSCSSQDWQQVVGSLTSTREVLCVLVGSV
SAPGTLQGLLKTIAAWDEFLPVLMMSENAAVELPEDLRRRVLSVLEMPPSYSKLLDSLHR
AQVYREMYDQARERGRHREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRRDAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERSFERVGSNKTQSIDVRIIAATHKNLENMIEIGSFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHAWPG
NVRELANLVERMAIMHPYGVIGVAELPKKFRYVDDEDEQMVDSLRSDIEERVAINNHTPN
FASGALLPPEGLDLKDYLGGLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRREGDEQAED
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaatcaagattctgctaatcgatgacgatagccagcgccgccgggatctg
gcggtcatcctgaattttcttggcgaagaaaacctttcctgctcgagccaggactggcag
caggtggtcggctctctgacctccacgcgggaagtgctgtgcgtactggtcggtagcgtc
agcgcaccgggcaccctgcaggggctgcttaagaccatcgcagcatgggatgagttcctt
cctgtgctgatgatgagcgaaaatgctgcggtcgagctgcccgaagatctgcgtcggcgt
gtgctttccgtactggaaatgccgccgagctacagcaaactgctcgactccctgcaccgc
gcccaggtctatcgtgaaatgtacgatcaggcccgcgagcgcggtcgtcaccgtgagccg
aacctgttccgcagcctggtcggtaccagtcgcgcgattcagcatgtgcggcaaatgatg
cagcaggtggccgacaccgacgccagcgtactgattctcggcgagtcggggaccggtaag
gaagtggttgcccgtaacctgcactaccactccaagcgtcgtgacgcgccgttcgtgccg
gtgaactgcggtgcgatcccggccgagctgcttgaaagcgaattgttcggccatgaaaaa
ggcgccttcaccggcgccatcaccagccgtgccgggcgtttcgaactggccaacggcggt
acgctgtttctcgatgaaatcggcgatatgccgttgccgatgcaggtcaaactgttgcgc
gtgctgcaggagcgctcgtttgaacgcgtgggcagcaacaagacccaaagtatcgacgtg
cgaatcattgccgcgacgcacaagaatctcgaaaacatgatcgagatcggcagctttcgc
gaagacctttattaccgtctcaacgtattcccgattgaaatggctccgctgcgtgagcgg
gtcgaagacatcccgttgctgatgaacgaactgatctcgcgcatggagcacgaaaagcgc
ggctcgatccgtttcaattcggctgcgatcatgtcgctgtgccgacatgcctggccgggt
aacgttcgtgagctggccaacctagtcgagcgcatggcgatcatgcacccatatggcgtg
atcggtgtggcggagttgccgaagaagtttcgctacgtcgatgatgaagacgagcagatg
gtcgacagcctgcgcagcgacatcgaagagcgtgtggccatcaacaaccacacgccgaac
ttcgcttccggtgccttgctgccgccagaagggctggacctcaaggactacctcggtggt
ctggaacagggtctgattcagcaggcgctggatgatgccaatggcatcgtggctcgcgcc
gccgaacgtctgcggattcgtcgtaccacgctggtggagaagatgcgcaagtacggcatg
agccgtcgtgagggtgacgaacaggcggaggattga
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