Pseudomonas cannabina pv. alisalensis: JGS08_18020
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Entry
JGS08_18020 CDS
T07379
Symbol
fliD
Name
(GenBank) flagellar filament capping protein FliD
KO
K02407
flagellar hook-associated protein 2
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JGS08_18020 (fliD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pcab02035
]
JGS08_18020 (fliD)
Bacterial motility proteins [BR:
pcab02035
]
Flagellar system
Flagellar assembly proteins
Filament
JGS08_18020 (fliD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FliD_C
FliD_N
Flagellin_IN
Barttin
Motif
Other DBs
NCBI-ProteinID:
QQN20508
LinkDB
All DBs
Position
complement(4038105..4039586)
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AA seq
493 aa
AA seq
DB search
MASPIVPTTGLGSGLQITAIVEGLVAAERAPKQTQIDQQTSATKASLSGVSQLTSALAAF
QKTLDTLSSSTPAFQGFAATSSNDAMVKATASNTAVNGTYAINVTNLASASKVSTAALTS
AQASAIPSGTLEITQNGTTQKVEIGQASTLQEVRDQINSSLQGKGITANIINDNNGSRLV
FSSTTTGAGSDISVKGAAGQEALNIDGTKLMKDTSTATDASGNPIPGAGAIIDVAKDAVF
SIDGLSLTSKTNTVSTAISGLSFDLIAPSTAAASTTTITVATNTEGLKTSLQSFVDSYNT
LVTLVGSLTKGSVAANGAFTPASLTGDATPRGLLAAVRDQIATATSNSGLGSLAQLGIKT
QQADGKLSLDTAQLTTALVDKKLGGQIQALFNGTGAKKADGTLVDGGLIARMSKALEPYT
KADGILATKTTSLNKVNARLAKDQEALELRITSLTEVLKAKYNKMDLLVGQLRASSSSIT
SIFEAMNAQKNAS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtccgattgtacctaccacaggcctggggtcaggtctgcaaatcactgcaatt
gtcgaagggctggtggcggctgaaagagcgccgaaacagacccagatcgaccagcagaca
tctgccaccaaagcgtcgttgtcaggcgttagccagctgacgtccgcattggccgcgttc
cagaagactctggacacgctcagtagcagcacgcctgcgtttcaaggttttgccgctaca
tcatccaacgatgcaatggtcaaggccacggcgagcaacacggccgtcaatggcacctat
gccattaatgtcaccaacctggcttctgcttcgaaggtctccacagctgcgcttacttcg
gcgcaagccagtgccattccgagtggtactctggaaatcactcagaatggcactacccaa
aaggttgagattggtcaggcttccaccctgcaagaggtgcgcgaccagatcaactcgtcg
ctgcagggcaaaggtattactgccaacatcatcaatgacaacaacggctcaaggctggtg
ttcagttcgaccactaccggcgcgggcagtgatatatcggtcaagggtgcagcgggccag
gaagcgttgaacattgacggcaccaagctgatgaaggacaccagtacggcgaccgatgcg
agtggtaatccgattcctggtgcgggagcgattatcgatgtggcgaaggatgccgtgttc
tctattgatggtctgagcctgaccagcaagacgaatacagtaagcaccgctatttccggt
ctttcatttgatctgattgcgccgagtacagcggctgcgtcaaccaccactatcacggtg
gccaccaataccgaaggcttgaagacgtcgctgcagtctttcgtcgactcctacaatact
ctggtcacactggtcggttctttgaccaagggctctgtcgctgccaacggtgcctttacc
cctgcgtctctgaccggtgatgcgacgccgcgtggcttgctggcagcggtgcgtgaccag
attgctaccgctacatcgaattccggtcttggctctctcgctcagttggggatcaagacc
caacaggctgacggcaagttgtcactggatacagctcagttgaccacggcactggtcgac
aaaaagcttggtgggcagatccaggcgttgtttaacggcaccggcgctaaaaaagctgac
ggcacgctggtggatggcggtttgatcgcacgcatgagtaaagcgctcgaaccctacacc
aaggccgatggcattctggccaccaagacgaccagtctgaacaaggtgaatgcaaggctg
gccaaggatcaggaagcgctggaactgcgtatcacctcgttgactgaggtgttgaaggcg
aagtacaacaagatggacctgctggtcggtcagctcagagcgtcgagcagtagcattacg
tcgatcttcgaggcgatgaacgctcaaaagaatgcgtcataa
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