Pseudomonas cannabina pv. alisalensis: JGS08_18330
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Entry
JGS08_18330 CDS
T07379
Name
(GenBank) L-serine ammonia-lyase
KO
K01752
L-serine dehydratase [EC:
4.3.1.17
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00260
Glycine, serine and threonine metabolism
pcab00270
Cysteine and methionine metabolism
pcab01100
Metabolic pathways
pcab01110
Biosynthesis of secondary metabolites
pcab01200
Carbon metabolism
pcab01230
Biosynthesis of amino acids
Module
pcab_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JGS08_18330
00270 Cysteine and methionine metabolism
JGS08_18330
Enzymes [BR:
pcab01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.17 L-serine ammonia-lyase
JGS08_18330
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Motif
Pfam:
SDH_alpha
SDH_beta
MmgE_PrpD_N
Serine_rich
Motif
Other DBs
NCBI-ProteinID:
QQN20563
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Position
4108475..4109851
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AA seq
458 aa
AA seq
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MAISVFDMFKIGIGPSSSHTVGPMRAGALFVTELRNQNRLHSVERIEVRLYGSLSATGIG
HGSDRATVMGLMGEWPDQIDPSQVNQRIDALRADNQLMLAGEQAITFVWERDMCLLDESL
PYHPNGMTLCAYGKTGEVHEQTYYSVGGGFVIDAEQAASGVLDNDTTVLPYDFFSGAQLL
KLCKTHGMSISELMMANEKVWRSEEEIREKIMVIWAAMRACVDKGLLETGILPGGLNVRR
RAYRLHQNLQNLDNPNVIGSTLSAMEWVNLFALAVNEENAAGGRMVTAPTNGAAGIVPAV
LHYFMKFKPTANDDDVVRFFLSAAAVGILCKKNASISGAEVGCQGEVGSACAMAAAGLAE
ILGATPEQVENAAEIGLEHNLGLTCDPVGGLVQIPCIERNAIAAVKAINAAQMALRGDGE
HHISLDHAIRTMRDTGADMHDKYKETSRGGLAVNLIEC
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggccatcagcgtcttcgacatgttcaaaatcggcatcgggccgtccagttcccacacc
gtcgggccaatgcgcgccggggcactgttcgtgaccgagctgcgcaaccagaaccggttg
cacagcgtagaacgtatcgaggtgcgattgtacgggtctctgtcagccacgggcatcggt
catggcagcgaccgtgcgaccgtcatggggttgatgggcgaatggccagaccagattgac
cccagccaggtcaatcaacgcatcgacgcactgcgtgccgacaaccaactcatgctggcg
ggcgagcaggccatcaccttcgtctgggaacgggacatgtgcctgctcgacgaaagcctg
ccctaccaccccaatggcatgaccctgtgcgcttatggcaagaccggtgaagtgcacgag
cagacctactattcagtgggcggcggctttgtcatcgacgccgaacaggccgccagcggc
gtgctggacaatgacaccaccgtgctgccttatgattttttcagcggcgcgcaactgctg
aaactgtgcaagacccacggcatgagcatttccgaactgatgatggccaacgagaaggtc
tggcgcagcgaagaggaaattcgcgaaaagatcatggtcatctgggcggcgatgcgcgcc
tgcgtcgacaagggcctgcttgaaaccggcatcctgcccggcggcttgaatgtgcggcgg
cgcgcctaccgcctgcaccagaacctgcagaacctcgacaacccgaacgtgatcggctcg
accctgagcgcgatggaatgggtcaacctgttcgccctggcggtcaacgaagaaaacgcc
gcaggtgggcgcatggtcaccgcgcccaccaacggcgcggccggtatcgtgcctgcggtg
ctgcactatttcatgaagttcaagcccacggccaacgatgatgacgtggtgcgcttcttc
ctgagtgccgctgcggtcggcattctgtgcaagaaaaacgcgtcgatctcgggtgccgaa
gtgggctgtcagggtgaagtcggctcggcctgcgccatggccgcagccgggctggcggag
attctcggcgcgacccccgaacaagtggaaaacgcagccgagattggcctggaacataac
ctggggctgacctgcgacccggtcggcgggctggtgcagattccctgcatcgaacgcaac
gcgattgctgccgtgaaggcgatcaatgccgcacaaatggccctgcgcggcgacggcgag
caccatatctcgctggaccacgccatccgcaccatgcgcgacaccggtgcggacatgcac
gacaagtacaaggaaacctcacgcggcgggctggcggtgaacctgatcgagtgctga
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