KEGG   Pseudomonas cannabina pv. alisalensis: JGS08_18735
Entry
JGS08_18735       CDS       T07379                                 
Symbol
sctD
Name
(GenBank) type III secretion system inner membrane ring subunit SctD
  KO
K03220  type III secretion protein D
Organism
pcab  Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:pcab00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcab02044]
    JGS08_18735 (sctD)
Secretion system [BR:pcab02044]
 Type III secretion system
  Type III secretion core apparatus
   JGS08_18735 (sctD)
SSDB
Motif
Pfam: Yop-YscD_cpl Yop-YscD_ppl_3rd FHA Y4YQ_C DUF6059
Other DBs
NCBI-ProteinID: QQN20633
LinkDB
Position
4193519..4194493
AA seq 324 aa
MFELRVLNGQHQGAALPLVGEQWSIGSAEELDLALDDAGVASLHCRLQRLDERWTLNAEE
GVVCDEQGNALPGLDVKLNSPFMLGPVWLCVSPAEDAWPSVPAVIPKQPQAEPEQARKDV
PLQKVRSRSQFLNRTTGIIAGLLVGVIGSAWSLTRPAAIAMDQGPAHIAAMTTDAPPDPA
RTPAKAAKPVTDGRIHLSSAEAVRHQLSTMLSDRLLTDVSVEETPDGLVLNGDLKEESLL
VYQRMLQRFKDRYDSPVNVMDNVASNRNALPFVVVQIMTGPHAHLVTADGRRVYVGDEVN
GLRLTRIDKQRLQFDGDRHVEVNW
NT seq 975 nt   +upstreamnt  +downstreamnt
atgtttgaattacgcgtactgaacggccagcaccagggcgcagcgttaccgctggtgggt
gagcaatggtcgatcggctctgccgaagaacttgatctggcactcgatgatgctggcgtg
gcgagcctgcattgccgcctgcaacggctggacgaacgctggaccctgaacgccgaagag
ggtgtggtctgcgacgaacaaggcaacgccctgcccggccttgatgtgaagctcaacagc
ccgttcatgctgggcccggtctggctgtgcgtttcgcctgccgaagatgcctggccttcc
gtaccggcggtcatcccgaaacagccacaggctgaacccgagcaagcgcgcaaagacgta
ccgctgcagaaagtcaggtcgcgctcgcaatttctcaaccgcaccacggggataatcgcc
ggtctgctggttggcgtcatcggcagcgcctggagcctgacccgtcctgccgccatcgcg
atggaccaaggcccggcgcacatcgccgcaatgacgacagatgcaccgccagatcccgca
aggacgccagcgaaagccgccaagccggtgaccgacggacgcatccacctgagcagcgct
gaggccgtccgtcatcaattgagcactatgctcagcgaccgcctgctgaccgatgtcagc
gtggaggagacaccggacgggctggttctcaacggcgacctcaaagaagaatcgctgctg
gtctaccagcgcatgctgcagcgcttcaaggatcgctatgactcgcctgtcaacgtaatg
gacaacgtcgccagcaatcgcaacgccttgccgtttgtagtcgtgcagatcatgaccggt
ccgcacgcgcatctggtgacagccgacggccgacgcgtctacgtgggcgacgaggtgaac
gggttgcgcctcacccgcattgacaaacagcgcctgcaattcgatggcgatcgtcatgtc
gaggtgaactggtga

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