Pseudomonas cannabina pv. alisalensis: JGS08_18895
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Entry
JGS08_18895 CDS
T07379
Name
(GenBank) effector protein
KO
K08994
ion channel-forming bestrophin family protein
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_18895
Transporters [BR:
pcab02000
]
Other transporters
Pores ion channels [TC:
1
]
JGS08_18895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bestrophin_2
Motif
Other DBs
NCBI-ProteinID:
QQN20663
LinkDB
All DBs
Position
4227895..4228842
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AA seq
315 aa
AA seq
DB search
MPGPFEKKWRCISRTVTYVGWSLFWLLLWDVAVTLDFMLIQGTGFIDLPLMPLTLLCSAL
IVLISFRNSSAYNRWWEARTLWGAMVNSSRSFGRQVLTLIENEREDGDNPIKAVLFKRHV
AYLRALRAHLKGNVGMAQLDGLLSPTEIQQASQSNNFPNDILNGSAAIIAQEFAAGRIDS
IRLARLESTMVELSNCQGGMERIANTPLPYPYVYFPRLFSTLFCIIMPLSMVTTLGWFTP
AISTVVGCMLLAMDRIGTDLQAPFGNSQHRIRMEDLCNTIEKNLRSMLDAPEKHRLVIDS
QGPEGAAWQMHRLAV
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcctggtccttttgaaaagaaatggcggtgcatcagcagaacggttacttacgttggc
tggtcgttgttctggctattgctctgggacgtggccgtgaccctcgacttcatgctgata
caaggcacgggttttatagatcttccgctgatgccgctgaccctgctgtgttccgcactt
atcgtgctgatcagctttcgcaactcgagcgcctacaatcgctggtgggaagcacgcacc
ttgtggggtgcaatggtcaacagctcgcgcagcttcggccgccaggtgttgacgctgatc
gaaaatgagcgtgaggacggcgacaacccgatcaaggccgtgctgttcaaacgtcacgtg
gcctacttacgggcgctgcgcgctcatctgaaaggcaacgtcggcatggcgcagctcgat
ggcctgctgtcgccaaccgagatccagcaagcgtcgcaaagcaacaacttccccaatgac
attctgaacggctccgccgccatcattgcgcaagagtttgccgccgggcgcatcgacagc
atccgtctcgcccggctggaatcgaccatggtcgagctgtccaactgccagggcggcatg
gagcgaatcgccaacacgccgctgccctacccttacgtctatttcccaaggctgttcagt
accctgttctgcatcatcatgccgctgagcatggtcaccaccctgggctggttcaccccg
gcgatatcgaccgtggtcggctgtatgctgctggcgatggaccgaatcggtaccgacttg
caggcgcccttcggcaacagccagcaccggattcgcatggaagacctgtgcaacaccatc
gaaaagaacctgcgctcgatgttagatgcaccagaaaagcacagactggtcattgactcg
caaggcccggaaggggctgcgtggcagatgcatcgactggccgtttga
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