Pseudomonas cannabina pv. alisalensis: JGS08_19245
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Entry
JGS08_19245 CDS
T07379
Name
(GenBank) MurR/RpiR family transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcab03000
]
JGS08_19245
Transcription factors [BR:
pcab03000
]
Prokaryotic type
Helix-turn-helix
Other families
JGS08_19245
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_31
RWP-RK
HTH_AsnC-type
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QQN20728
LinkDB
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Position
4302198..4303064
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AA seq
288 aa
AA seq
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MDRVRNLLEQIQGRLDELNKAERKVAEVILLNPQMATRLSIAALAQAAKVSEPTVNRFCR
SFNVSGYPELKLQLAQSLASGAAYVSRAVEADDNPEAYTQKIFGSAIASLDSACQQLDPA
LISKSVDMLIQARQIHFFGLGASAPVALDAQHKFFRFNLAVTAHADVLMQRMIASVAHTG
ELFVIISYTGRTRELVEVARIARANGASVLGLTAAGSPLAQASTVSLNIPLPEDTDIYMP
MTSRIIQLTVLDVLATGMTLRRGVDFQPHLRKIKESLNDSRYPIEDQG
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgtaagaaacctcctggagcaaatccagggccgactcgatgagttgaacaag
gccgaacgcaaggtggccgaggtgattctgctcaacccgcagatggcgacccgcttgagc
attgcagcgctcgcccaggctgccaaggtcagcgaaccgacggtcaaccgtttctgccgc
tcgttcaacgtcagtggttacccggaactcaagttgcaactggcgcagagcctggccagc
ggcgcagcctatgtcagccgtgcggtggaagccgacgataatcccgaagcgtatacccag
aagattttcggcagcgccattgcttcgctggacagcgcctgccagcaactggacccggcg
ctgatcagcaagtcggtggacatgctgatccaggcgcggcagatccattttttcgggctg
ggcgcctccgcgccggtggcgctcgatgcgcagcacaaattcttccgcttcaatctggca
gtcacggcgcatgccgacgtgctgatgcagcggatgattgcctcggtggcgcacacgggg
gagttgtttgtgatcatttcctacaccggccgcacccgcgagctggtggaagtggcacgc
atcgcacgggccaatggcgcttcggtgctgggcctgaccgcggcaggttcgccgctggct
caagccagcaccgtgagcctgaatattccgctgccggaagacaccgacatttatatgccg
atgacctcgcggatcattcagctcaccgtccttgatgtgctggcgaccggcatgaccctg
cgccgcggcgtcgactttcagccgcacctgcgcaagatcaaggagagtttgaacgacagc
cgctatccgatcgaagaccagggctga
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