Pseudomonas cannabina pv. alisalensis: JGS08_19360
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Entry
JGS08_19360 CDS
T07379
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00260
Glycine, serine and threonine metabolism
pcab00630
Glyoxylate and dicarboxylate metabolism
pcab00670
One carbon pool by folate
pcab00785
Lipoic acid metabolism
pcab01100
Metabolic pathways
pcab01110
Biosynthesis of secondary metabolites
pcab01200
Carbon metabolism
Module
pcab_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JGS08_19360 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JGS08_19360 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JGS08_19360 (gcvP)
00670 One carbon pool by folate
JGS08_19360 (gcvP)
Enzymes [BR:
pcab01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
JGS08_19360 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
DUF7317
Motif
Other DBs
NCBI-ProteinID:
QQN20750
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Position
4330128..4332992
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AA seq
954 aa
AA seq
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MTDRIQLSTANEFIARHIGPRADDELAMLQTLGFDSIEALSESVIPESIKGTSVLDLPAG
QSEADALASIKAIASKNQLFKTYIGQGYYNTHTPAPILRNLLENPAWYTAYTPYQPEISQ
GRLESLLNFQTLISDLTGLPIANASLLDEATAAAEAMTFCKRLSKNKSSQQFFASSHCHP
QTLDVLRTRAEPLGITVVVADETELGDVSDYFGALLQYPASNGDVFDYRELVERFHAANA
LVAVAADLLALTLLTPPGEFGADVAIGSAQRFGVPLGFGGPHAAYFSTRDAFKRDMPGRL
VGVSVDRHGKQALRLAMQTREQHIRREKATSNICTAQVLLANIASMYAVYHGPRGLTQIA
NRVHHLTAILAEGLSQLGLKAEQAFFFDTLTLVTGSQTAALHAAARSRHINLREIDDQRL
GLSLDETTSQSAVETLWEIFASDGQSLPDFAALADSVQSRLPAALQRQSAILSHPVFNRY
HSETELMRYLRKLADKDLALDRTMIPLGSCTMKLNAASEMIPVTWAEFGNLHPFAPAEQS
AGYQQLTDELETMLCAATGYDAISLQPNAGSQGEYAGLLAIRAYHQSRGDEHRDICLIPS
SAHGTNPATANMAGMRVVVTACDARGNVDIEDLRAKAVQHRDQLAALMITYPSTHGVFEE
GIREICGIVHDHGGQVYIDGANMNAMVGLCAPGKFGGDVSHLNLHKTFCIPHGGGGPGVG
PIGVKSHLAPFMPGHARMERKEGAVCAAPFGSASILPITWMYIRMMGGEGLKRASQLAIL
NANYISRRLEEHYPVLYTGANGLVAHECILDLRPIKDSSGISVDDVAKRLIDFGFHAPTM
SFPVAGTLMIEPTESESREELDRFCDAMIKIREEIRAVEEGTLDKDDNPLKNAPHTAAEI
VGQWSHPYSREQAVYPVDSLIENKYWPPVGRVDNVFGDRNLVCACPSIESYQEA
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccgtattcaactgagcaccgccaacgaattcatcgcccgtcacatcggcccg
cgcgccgacgacgagctggccatgttgcaaacgctgggttttgactccatcgaagcattg
agcgaaagcgtgatcccggaaagcatcaagggcaccagcgtgctcgatctgcctgccgga
cagagcgaagccgatgcgctggcgtccatcaaagccatcgccagcaagaaccagctgttc
aaaacctacatcggccagggttactacaacacccatacaccggcgccaatcctgcgcaac
ctgctggaaaacccggcctggtacaccgcttataccccgtatcaaccggaaatttcccaa
ggccgtctggagtcgctgctcaatttccagaccctgatcagcgacctgaccggcctgccg
attgccaacgcctcgctgctggacgaagccaccgcagcggcggaagcgatgacgttctgc
aagcgcctgagcaagaacaaaagcagtcagcagttcttcgcctccagccactgccacccg
cagaccctcgatgtattgcgcacccgtgccgaaccgctggggatcacggtcgtggttgcc
gatgagaccgaactgggcgatgtcagcgattacttcggtgcgctgctgcaatacccggcc
agcaatggtgacgtgttcgattaccgcgaactggtcgagcgcttccacgctgccaacgcg
ctggtagcggtggcggccgatctgctggccctgaccctgctgaccccgccgggcgagttc
ggcgcagacgtggccatcggcagtgcgcaacgcttcggtgtgccgttgggcttcggcggc
ccgcatgcggcctatttctcgacgcgcgacgcgttcaagcgtgacatgccgggccgtctg
gtcggcgtgtcggtggatcgccacggcaagcaggccctgcgcctggccatgcaaacccgc
gaacaacatatccgccgcgaaaaggcgaccagcaacatttgcaccgcacaggtattgctg
gccaatatcgccagcatgtacgcggtgtatcacggcccgcgcggcctgacacagatcgcc
aaccgcgtgcaccacctgaccgcgatcctggccgaaggcttgagccagctgggcctgaaa
gccgaacaagcgttctttttcgacaccctgacgctggtcaccggcagccagaccgccgca
ctgcatgctgccgcccgctcgcgtcacatcaacctgcgcgaaatcgacgatcagcgtctg
ggcctgtcactcgacgaaaccacgtcacagtcggcggtcgaaacgctgtgggaaatcttc
gccagcgatggtcagagccttccggatttcgccgcactggcagacagcgttcagtcgcgt
ctgcccgctgctctgcagcgccaatcggccatcctcagccatccggtattcaaccgctat
cactctgaaaccgagctgatgcgctacctgcgcaagctggccgacaaggacctggcactg
gaccgcaccatgatcccgctgggctcgtgcaccatgaagctcaacgccgccagcgaaatg
atcccggtgacctgggccgagttcggcaatctgcacccttttgctcctgccgagcagagc
gctggctaccagcaactgaccgacgaactggagaccatgctctgcgcggccactggctat
gacgcgatttcgctgcaaccaaacgctggctcccagggtgaatacgccggcctgctggcg
atccgcgcttatcatcagagccgtggcgacgagcaccgtgacatctgcctgatcccgtca
tcggcgcacggcaccaacccggcgaccgccaacatggccggcatgcgcgtcgtggtgacc
gcctgtgatgcgcgcggcaacgtcgacatcgaagacctgcgcgccaaggccgttcagcac
cgcgaccagcttgcagcgctgatgatcacctacccgtcgacccacggcgtgttcgaagaa
ggcattcgcgaaatctgcggcatcgttcatgatcatggcggccaggtttacatcgatggc
gccaacatgaacgcgatggtcggcttgtgcgcgccgggcaagttcggcggcgacgtctcg
cacctcaacctgcacaagaccttctgcattccgcacggcggcggtggcccgggcgtcggt
ccgattggcgtcaagtctcacctcgcgccgttcatgccggggcacgcacgcatggagcgc
aaggaaggcgcggtctgcgcagcgccattcggcagcgccagcatcctgccgatcacctgg
atgtatatccgcatgatgggcggcgaaggcctcaagcgcgcctcgcaactggcgatcctc
aatgccaactacatttcgcggcgcctggaagagcattacccggtgctgtacaccggcgcc
aacggtctggttgcgcatgagtgcatccttgacctgcgcccgatcaaggacagcagcggc
atcagcgtcgatgacgtggccaagcgcctgatcgacttcggcttccacgcaccgaccatg
tcgttcccggtggccggaacgctgatgatcgagccgaccgaaagtgaatccagagaagaa
ctggaccgcttctgcgacgccatgatcaagatccgcgaagaaatccgtgcggttgaagaa
ggcacgctggacaaggacgacaatccactgaaaaacgcgccgcacaccgctgcggaaatc
gtcggccagtggagtcacccctacagccgcgagcaggcggtgtacccggtcgattcgttg
atcgaaaacaagtattggcctccggtcggacgcgtcgacaacgtattcggtgaccgcaat
ctggtctgcgcctgcccgtccatcgagagctatcaggaagcctga
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