Pseudomonas cannabina pv. alisalensis: JGS08_19560
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Entry
JGS08_19560 CDS
T07379
Name
(GenBank) mannuronate-specific alginate lyase
KO
K01729
poly(beta-D-mannuronate) lyase [EC:
4.2.2.3
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00051
Fructose and mannose metabolism
pcab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
JGS08_19560
Enzymes [BR:
pcab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.3 mannuronate-specific alginate lyase
JGS08_19560
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GFIT
Motif
Pfam:
Alginate_lyase
Motif
Other DBs
NCBI-ProteinID:
QQN20788
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Position
4375807..4376943
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AA seq
378 aa
AA seq
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MQTPKLIRPTLLSLAMLSSMAWAAGASAALVPPKGYDAPIEKMKTGDHNFTCEAIPKPYT
DKLVFRSKYEGSDKARATLNAVSEEAFRDATKDITDLERGVSKIVMQYMRDGRPEQLDCA
LNMMTTWAKADALESREFNHTGKSMRKWALGSMSSAYLRLKFSESRPLANRQQDAQIIEA
WFSKLADQVVSDWSNLPLEKINNHSYWAAWSVMATAVVTNRQDLFDWAVKEFKVAANQVD
KDGFLPNEMKRRQRALSYHNYALPPLAMIASFAQANGVDLRQENNGALKRLGDRVLAGVK
DPSVFTQHNGEKQDMTDLKKDPKFAWLEPYCSLYTCSPDVLEEKHEKQPFKTFRLGGDLT
KVYDPTHEKGDKGDNDGS
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcagactcctaaactgatccgccctaccctgctgtcgctggcaatgctgtcatcgatg
gcctgggctgcgggcgcgtccgccgcgctggttccacccaagggttatgacgctccaatc
gaaaaaatgaagacgggcgatcacaattttacctgtgaagccattcccaagccgtacacc
gacaagctggtgttccgcagcaaatacgaaggttcggacaaagcccgcgcgaccctcaac
gcggtctccgaagaagcgtttcgcgacgcaaccaaggacatcaccgaccttgagcgtggc
gtcagcaaaatcgtcatgcagtacatgcgcgacggtcgtcctgaacagctcgattgcgcg
ctgaacatgatgaccacttgggccaaggccgatgcgctggagtcccgcgagttcaaccac
accggcaagtccatgcgcaaatgggcactgggcagcatgtcctccgcctacctgcgcctg
aagttctccgaatcgcgtccgctggccaatcgtcagcaggacgcgcagatcattgaagcc
tggttcagcaaactggccgatcaggtggtcagcgactggagcaatctgccgctggaaaaa
atcaacaaccactcgtactgggctgcctggtcggtgatggcgactgccgtcgtgaccaac
cgtcaggacttgttcgattgggccgtcaaggaattcaaggtcgccgccaatcaggtggac
aaggacggtttcctgcccaacgagatgaagcgccgtcaacgcgccctgtcatatcacaac
tacgccctgccgccactggccatgatcgccagctttgcccaggccaacggtgtggatttg
cgtcaggaaaacaacggcgctctgaagcgtttgggtgatcgcgtccttgcgggcgttaaa
gacccatcggttttcactcagcacaacggtgaaaaacaggacatgacggacctgaaaaag
gacccgaaattcgcctggctcgaaccgtactgctcgctctacacctgcagcccggatgtg
ctggaagaaaagcatgaaaagcagccgttcaaaaccttccgcctgggcggcgacctgacc
aaggtctacgacccgacgcacgaaaaaggcgacaagggcgataacgacggctcgtga
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