Pseudomonas cannabina pv. alisalensis: JGS08_19665
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Entry
JGS08_19665 CDS
T07379
Name
(GenBank) LysR family transcriptional regulator
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcab03000
]
JGS08_19665
Transcription factors [BR:
pcab03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JGS08_19665
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
QQN20806
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Position
complement(4399969..4400844)
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AA seq
291 aa
AA seq
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MELVWLEDLSALAEYGSFVRAAEARHVTQPAFSRRVRSLENWMGVQLFVRTPQGATLTEA
GRQILPSAQEAARHLYRMRSEAQEVAGVAARSLQFAATHSLSFTFFPKWLRNAGNGAPIE
AVQLHSDSMAVCEQMLIHGQVQFLLCHRHPDVPPLLAPDQFVSKKVGEDVLVPLASASAN
VGTSPAALPYLAYTHESGLGRIVAHRLRGKEDYLHLKPLFSSHLAAVLMSMALESKGVAW
LPKSLTEQEVLDGRLVRALDESWDIPLEIHLTRPKAILSQSAEAFWGRAGW
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
gtggaactggtttggctcgaagatctttcagcgctcgcggagtacggcagttttgtgcgc
gccgctgaagcacggcatgtcacccagccagccttcagccgcagagttcggtccctggaa
aactggatgggggttcagctgtttgtgcgcacgccacaaggcgcaacccttaccgaggcc
ggccggcagattttgcccagcgcccaggaagctgcccgacatttgtaccgaatgcgcagc
gaggcccaagaggtggccggagtagccgccaggtcactgcagttcgccgcaacgcactcc
ctgtcgttcacgtttttccccaagtggctcagaaacgccggaaacggtgcgccgatcgag
gccgtgcaactgcattcggacagcatggcggtctgcgagcagatgctgatccatggccaa
gtgcagtttctcctctgccaccgccaccccgacgtcccgccgttgctggcacccgatcag
ttcgtcagcaagaaagtgggcgaggacgttctcgttccgcttgccagcgcctccgccaac
gtcggcacctcacccgcagcgctaccctacctcgcgtacacccacgaatccggactggga
cgcatcgtcgcccaccgactgcgcggcaaggaagattacctgcacctcaaaccgctgttc
agcagccaccttgcggcagtgctcatgtccatggcattggaaagcaaaggagtggcgtgg
ctgcccaagagcctcaccgaacaggaggtgctggacgggcgtttggtcagggcactcgat
gagagctgggatataccgttggagattcatttgaccaggccgaaggcaattcttagccag
tcagcggaagcgttctgggggagggcggggtggtga
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