Pseudomonas cannabina pv. alisalensis: JGS08_19775
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Entry
JGS08_19775 CDS
T07379
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00061
Fatty acid biosynthesis
pcab00071
Fatty acid degradation
pcab01100
Metabolic pathways
pcab01212
Fatty acid metabolism
pcab02024
Quorum sensing
pcab04146
Peroxisome
Module
pcab_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
JGS08_19775
00071 Fatty acid degradation
JGS08_19775
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JGS08_19775
09145 Cellular community - prokaryotes
02024 Quorum sensing
JGS08_19775
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pcab01004
]
JGS08_19775
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcab04147
]
JGS08_19775
Enzymes [BR:
pcab01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
JGS08_19775
Lipid biosynthesis proteins [BR:
pcab01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
JGS08_19775
Exosome [BR:
pcab04147
]
Exosomal proteins
Exosomal proteins of breast milk
JGS08_19775
Exosomal proteins of breast cancer cells
JGS08_19775
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QQN20826
LinkDB
All DBs
Position
complement(4433608..4435299)
Genome browser
AA seq
563 aa
AA seq
DB search
MNENFWKDKYPSGIPVDINPDEYPNVQAVLKQSCERFADKPAFSNLGKTITYGELYELSG
AFAAWIQQYTDLQPGDRIAVQLPNLLQYPIAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTQVRTVIITEVADLLSPLKRLLINSVVKYVKKMVPAYH
LPQAIKFNDILAKGRGQPVTEVAPAAADIAVLQYTGGTTGIAKGAMLTHRNLIANMLQCR
ALMASNLNEGCEILITPLPLYHIYAFTYHCMAMMLLGNHNVLISNPRDLPAMVKELSKWK
FTGFVGLNTLFVALCNNEGFRNLDFSALKVTLSGGMALQQAAAERWKQVTNCPICEGYGM
TETSPVATVNPIQNIQMGTIGIPVPSTLCKVIDDAGNEVAFGERGELCVKGPQVMKGYWQ
RQDATDEMLDADGWLKTGDIAIIQPDGYIRIVDRKKDMILISGFNVYPNELEDVLATLPG
VLQCAAIGIPDEKSGESIKVFVVARPGVTLTKEKVMEHMRANLTGYKVPRSVEFRDVLPT
TNVGKILRRELRDEEMKKLGVKK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaacttctggaaggacaagtacccgtccggtatccccgttgatatcaatccc
gatgagtaccccaatgtccaggcagtcctgaagcagtcctgcgagcgtttcgcggacaag
ccggcattcagcaaccttggcaagaccatcacgtatggcgagttgtatgagctgtccggt
gcgttcgcggcctggatccagcagtacaccgacttgcagccgggcgaccgtatcgccgta
cagctacccaatcttttgcagtacccgatcgccgtttttggtgccattcgcgccggcttg
atcgtggtcaacaccaacccgctgtacaccgcacgggaaatggaacaccagttcaatgac
tccggcgccaaggcgctggtatgtctggccaacatggcgcatctggccgaaaaagtcgta
cccaaaactcaggtcaggacagtcatcatcactgaggtggccgacctgctgtcgccgctc
aagcgcctgctgatcaatagcgtcgtcaagtacgtgaaaaaaatggtcccggcctaccac
ttgccgcaggctatcaagttcaacgacatcctggccaagggccgtggccagccagtgacc
gaggtcgcgcccgctgccgcagatattgcagtcctgcaatataccggcgggaccaccggt
attgccaaaggggcgatgctgacccaccgcaatctgatcgccaacatgctccagtgccgg
gcgctgatggcttcgaacctcaacgaaggttgcgaaatcctcatcacgccgctgccgctg
tatcacatctacgcctttacctatcactgcatggcaatgatgttgctcggtaaccacaac
gttctgatcagcaacccgcgtgacctgccggcgatggtcaaggaactgtcgaagtggaaa
ttcaccggctttgtcggcctcaataccctgtttgtagcgctgtgcaacaacgaaggcttc
cgcaatcttgatttttccgcactgaaagtcacgctgtctggcggcatggccctgcaacag
gccgctgccgagcgctggaagcaggtcaccaattgcccgatctgcgagggttacggcatg
accgagaccagcccggtggcgacggtcaatccgatccagaacatccagatgggcaccatc
ggcattccagtgccctcgacgctgtgcaaagtcatcgacgatgcgggcaacgaggtggcg
ttcggcgaacgcggcgaactgtgcgtcaaggggccgcaagtcatgaaaggctattggcag
cgccaggacgccaccgacgagatgctcgacgccgacggctggctcaagactggcgatatc
gcgatcatccagcccgacggctacatccggattgtcgatcgcaagaaggacatgattctg
atctccggtttcaacgtctaccccaacgaactggaagacgtactcgccacgctgcccggc
gtgctgcaatgcgcggcaatcggcataccggacgagaaatcaggggaaagcatcaaggtc
ttcgtcgtcgccaggcccggcgtgacgctgaccaaagagaaagtcatggaacacatgcgc
gccaacctgaccggctacaaggtcccgcgcagcgtggagttccgcgacgtcctgcccacc
accaacgtcggcaaaatcctgcgtcgcgagttgcgtgacgaggaaatgaagaagctgggt
gtgaagaagtag
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