Pseudomonas cannabina pv. alisalensis: JGS08_19780
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Entry
JGS08_19780 CDS
T07379
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00061
Fatty acid biosynthesis
pcab00071
Fatty acid degradation
pcab01100
Metabolic pathways
pcab01212
Fatty acid metabolism
pcab02024
Quorum sensing
pcab04146
Peroxisome
Module
pcab_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
JGS08_19780
00071 Fatty acid degradation
JGS08_19780
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JGS08_19780
09145 Cellular community - prokaryotes
02024 Quorum sensing
JGS08_19780
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pcab01004
]
JGS08_19780
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcab04147
]
JGS08_19780
Enzymes [BR:
pcab01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
JGS08_19780
Lipid biosynthesis proteins [BR:
pcab01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
JGS08_19780
Exosome [BR:
pcab04147
]
Exosomal proteins
Exosomal proteins of breast milk
JGS08_19780
Exosomal proteins of breast cancer cells
JGS08_19780
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QQN20827
LinkDB
All DBs
Position
complement(4435667..4437355)
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AA seq
562 aa
AA seq
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MQADFWNDKRPAGVDPDVDLQAWHSVMDVFDRCCKKFADRPAFSNMGVTLTYADLERHSL
AFAGYLQQHTGLLPGDRIAVQMPNLLQYPIAVFGAIRAGLIVVNTNPLYTAREMRHQFQD
SGAKALVYLNVFGKLVQEVLPDTAIEYLIEVKMGDMQSAAKGWLVNTIVDKVKKLVPDYQ
LPQAIGFKRALRIGRDSQVRSVAQRLDDVAVLQYTGGTTGLAKGAMLTHGNLVANMQQVY
ACMRQQYPDGRRAFEEGTEVMIAPLPLYHIYAFTGHCMCMMIGGNHNVLITNPRDITGFI
KELRKWKFTAMIGVNTLFVALMNHPEFKNLDFSTLKSTNSGGTALVKATAERWAQITGCT
IVEGYGLTETSPVASANPYGTQARLGTVGIPVPGTAMKVIDDEGVELPFGERGELCIKGP
QVMKGYWNRPDATAEALDAEGWFKTGDIAVIAADGFVSIVDRKKDLIIVSGFNVYPNEIE
DVVMAHPKVASCACIGVPDERTGEAVKLFVVPREEGVSTEELKAFCKENFTAYKVPKHIV
LRDSLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctgatttctggaatgacaagcgcccggctggcgtcgacccggacgtggatctg
caggcctggcactcggtcatggacgtgtttgatcgctgctgtaagaaatttgccgatcgc
ccggcgttcagcaatatgggcgtgaccctgacctatgccgacctcgagcgccactcgctg
gcctttgccgggtatctgcaacagcacacagggctgctgcccggcgaccgcatcgctgtg
cagatgcctaacttgttgcagtatccgatcgccgtgttcggtgcgatacgtgccggcctg
atcgtcgtcaacacgaacccgctgtacaccgcgcgcgagatgcgccatcagtttcaggac
tccggtgccaaggcgctggtctatctcaatgtgttcggcaagctggtgcaggaagtcctc
ccggacactgccatcgaatacctgatcgaagtgaaaatgggtgacatgcagtcggcggcc
aaaggctggctggtcaacaccatcgtcgacaaggtcaagaaactggttcccgactaccag
ctaccccaagccattggcttcaagcgcgcgttgcgcatcgggcgtgacagtcaggtccga
tcagtcgcgcaacgcctggatgacgtcgctgtactgcaatacaccgggggcaccacgggg
ctggccaaaggcgcgatgctgactcacggcaatctggtcgccaacatgcagcaagtctat
gcctgcatgcgccagcaatatcctgacgggaggcgggcgttcgaagagggtaccgaggtg
atgatcgcgccgctgccgctttaccatatctatgcattcacagggcattgcatgtgcatg
atgatcggtggcaaccacaatgttctgatcaccaatccgcgcgatatcacaggctttatc
aaggagctgcgcaagtggaaattcacggccatgatcggggtcaataccttgttcgtcgcg
ctgatgaaccatcccgagttcaagaatctggatttctccacgttgaagagcaccaattcc
gggggcactgcgctggtcaaggccacggccgagcggtgggcacagatcaccggctgcacg
attgtcgagggctacggcctgaccgaaacgtcgcctgttgccagcgccaacccttatgga
acgcaggcgcgtctgggtacggtcggtattccggtgcccggcacggcgatgaaagtcatc
gatgacgagggcgtggaactgccgttcggcgagcgcggcgaattgtgcatcaaggggccg
caggtcatgaaaggctactggaatcgtccggatgccacggccgaagcacttgacgccgaa
ggctggttcaagactggcgacattgccgtgatagctgccgacgggttcgtcagtatcgtg
gatcgcaaaaaagacctgatcattgtttccggtttcaacgtctaccccaacgaaatcgaa
gacgtggtcatggctcatccgaaagtcgccagttgcgcctgcatcggcgtgcctgacgag
cgtaccggagaggccgtcaagctgttcgtggtgccgcgggaggagggggtcagcacagaa
gagctcaaggcgttctgcaaggaaaacttcacagcctataaggtgcccaagcatatcgtg
ctgcgcgattcgttgccgatgacgccggtgggcaaaattctgcgcagggagcttcgcgac
atcgcctga
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