Pseudomonas cannabina pv. alisalensis: JGS08_20430
Help
Entry
JGS08_20430 CDS
T07379
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcab03019
]
JGS08_20430 (rnc)
03009 Ribosome biogenesis [BR:
pcab03009
]
JGS08_20430 (rnc)
03036 Chromosome and associated proteins [BR:
pcab03036
]
JGS08_20430 (rnc)
Enzymes [BR:
pcab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
JGS08_20430 (rnc)
Messenger RNA biogenesis [BR:
pcab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JGS08_20430 (rnc)
Ribosome biogenesis [BR:
pcab03009
]
Eukaryotic type
90S particles
RNase
JGS08_20430 (rnc)
Prokaryotic type
rRNA processing factors
JGS08_20430 (rnc)
Chromosome and associated proteins [BR:
pcab03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
JGS08_20430 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
QQN20952
LinkDB
All DBs
Position
complement(4578433..4579122)
Genome browser
AA seq
229 aa
AA seq
DB search
MSVSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFP
QAREGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMEAARERVLAWLTTEFDSLTLVDTNKDPKTRLQEFLQSRACDLPRYEVVDIQG
EPHCRTFFVECEINLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGHD
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtatccctgagccgcctggagcgtcagctcggctacaccttcaaggatcaggag
ctgatggtcctggcgttgacccaccgcagctttgcgggtcgcaacaatgagcgtctggaa
ttcctcggcgatgccatactcaacttcgtcgccggcgaggcgctgttcgaacgctttccg
caggcccgcgaaggtcagttgtcacgcttgcgtgcgcggttggtgaaaggcgaaaccctg
gcgctgctggcgcgtggtttcgatctgggcgaatacctgcgtctgggctccggcgagctg
aaaagcggcggtttccgtcgtgagtccattctggctgacgcactggaagcgctgatcggt
gcgatctatctcgatgccggcatggaagcggcccgcgaacgtgtgctggcctggctgacc
accgagttcgacagcctgacgctggtggacaccaacaaggacccgaaaacccgactgcag
gaattccttcagtcgcgcgcctgcgatctgccgcgttacgaagtggtggatattcagggc
gaaccgcattgccggacgtttttcgtcgaatgcgagatcaaccttttgaatgaaaagagc
cgaggacagggtgtcagccgccggattgccgaacaggtagccgcagcagccgcactcatt
gccctgggcgtggagaacggtcatgactga
DBGET
integrated database retrieval system
