Pseudomonas cannabina pv. alisalensis: JGS08_20525
Help
Entry
JGS08_20525 CDS
T07379
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JGS08_20525 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcab03400
]
JGS08_20525 (ung)
Enzymes [BR:
pcab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JGS08_20525 (ung)
DNA repair and recombination proteins [BR:
pcab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JGS08_20525 (ung)
Prokaryotic type
JGS08_20525 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QQN20970
LinkDB
All DBs
Position
complement(4597762..4598454)
Genome browser
AA seq
230 aa
AA seq
DB search
MTSEDRIKLEPSWKEALRDEFEQPYMAQLREFLRQEHAAGKEIYPPGPLIFNALNSTPLD
NVKVVILGQDPYHGPNQAHGLCFSVQPGVPTPPSLVNIYKELKRDLNIDIPNHGCLQSWA
DQGVLLLNTTLTVERANAASHAGKGWQHFTDRIIQVVSEHQPHLVFLLWGAHAQSKQKLV
DATKHLVLTSVHPSPLSAYKGFLGNGHFGRANKYLEQNGIEPIDWRLPNL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactagcgaagaccgcatcaagcttgagcccagctggaaagaagccctgcgtgacgag
ttcgaacagccctacatggctcagctgcgtgagtttctgcgtcaggagcatgcggccggc
aaggagatctatccgccggggccactgatcttcaacgcgctgaattccacgccgctggat
aacgtgaaagtggtaatcctcggtcaggacccgtaccacggcccgaatcaggcccatggt
ttgtgcttctcggtgcagcccggcgtgccgacgccaccgtcactggtcaacatctataaa
gagctgaagcgtgacctgaacatcgacattcccaatcacggttgcctgcaatcctgggcc
gaccaaggcgtgctgctgctcaacaccaccctgactgtcgagcgcgccaacgctgcctcg
catgcgggcaaaggctggcagcacttcaccgaccggatcattcaggtggtcagcgagcat
cagccgcatctggtgtttctgttatggggcgctcatgcgcagagcaaacagaagttggtc
gatgcgaccaagcacctggtgctgacgtccgtccatccatcgccgctgtcggcttataaa
ggctttttgggcaacggtcatttcgggcgggccaacaagtaccttgagcaaaacggcatc
gaaccgatcgattggcgactgccgaatctgtga
DBGET
integrated database retrieval system
