Pseudomonas cannabina pv. alisalensis: JGS08_20560
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Entry
JGS08_20560 CDS
T07379
Name
(GenBank) 5-oxoprolinase/urea amidolyase family protein
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00220
Arginine biosynthesis
pcab00791
Atrazine degradation
pcab01100
Metabolic pathways
pcab01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
JGS08_20560
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
JGS08_20560
Enzymes [BR:
pcab01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
JGS08_20560
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
HlyD_3
RimK
ATP-grasp_5
ATP-grasp_3
HlyD_D23
NQRA_N
GCV_H
Motif
Other DBs
NCBI-ProteinID:
QQN20976
LinkDB
All DBs
Position
4603800..4608032
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AA seq
1410 aa
AA seq
DB search
MFDKLLIANRGAIACRILRTLRTLQVKGVAVYSEADAASLHLMQADEAHSLGEGGAAGTY
LAVDKILAIANASGAKAIHPGYGFLSENAGFAQACEDAGIAFVGPTPEQLRVFGLKHTAR
ALARQHGVPLLEGTELLDSLEAAIAAARSIGYPVMLKSTAGGGGIGMRVCRSAEELADSF
EAVKRLGQNNFSDAGVFIEKYIQRARHLEVQVFGDGQGDVLALGVRDCSVQRRNQKVLEE
TPAPNLPDSMADELCAAAIKLARAVNYRSAGTVEFVFDSEDQRFYFLEVNTRLQVEHGVT
EQVWGVDLVSWMVQLAAGDLPPLDQLQAGLKPVGHAIQARLYAEDPGRDFQPCPGLLTAV
SFPPADGRGLRIDTWVEAGCEIPPYFDPMIAKLISWAPNRDQASAGLAAALHETRLYGVE
TNRDYLRQIIDDTPFASGQPWTRCLEGLVYHADTFEVLSGGTQTSVQDYPGRLGYWAVGV
PPSGPMDSRALRQGNRLLGNAEGCAALEITMSGPLLRFNTDAVIAVTGAQIPIALDGESC
AMNTALLVRAGSTLSLGTIAGAGVRSYLCVRGGLDVPDYLGSKSTFTLGQFGGHGGRALR
AGDVLHIAPLVDRNAGQRIADEELDELKEVRQIRVIYGPHAAPEYFTEAYIETFFATNWE
VHFNSSRTGVRLIGPKPEWVRADGGEAGLHPSNIHDNPYAIGAVDFTGDMPVILGPDGPS
LGGFVCPVTIIEADLWQLGQLKAGDRVRFYPVSVESCHAAMNLQGSTYNCGSGPGDASLA
REGNSSDTENTSDVLAHSRTSPLPQGPIHPCGSELAREGNSSDTENTSDVPAHSRTSPLP
QGPIHPCGSELAREGNSSDTENTSDVLAHSRTSPLPQGSTYNCGSELARESNLPDTENTS
DVPASSRASSLPQGPIHPCGSELAREGDIPDTENTSDVPAHSRTSPLPQGPIHPCGSELA
REGDIPDTENTSDVPASSRASSLPQGVGSFLHKLPSPIILDIGQADKRLVARLSGDTHLL
LEIGAPELDLVLRLRGHALMLALEAQPLAGVIDLTPGIRSLQVHYRPEQLPLRRLLDIIA
GEWDAVCAAKDLHVASRIVHLPLSWDDPACQLAIEKYMTTVRKDAPWCPSNLEFIRRIND
LPNLDEVQRTVFDASYLVMGLGDVYLGAPVATPLDPRHRLVTTKYNPARTWTAENSVGIG
GAYMCVYGMEGPGGYQFVGRTLQMWNRYREVAAFEGKPWLLRFFDQIRFYPVSADELLRI
RRDFPLGRFALNIEHSTLNLTDYQAFLTRETDGIAAFRAQQQSAFNAERERWIANGQADF
QNDEGAAPSSEELPLQPGQQGIDSHIAGNLWQVQVQPGERVEAGDVLVILESMKMEIPLL
APVGGVVQEVRVQPGSAVRAGQRVVVLAAD
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacaaactgctgattgccaatcgtggcgccattgcctgccgcatcctgcggact
ctgcgcaccttgcaggtcaaaggcgtggcggtgtattccgaagccgacgctgccagcctg
cacctgatgcaggccgacgaagcccacagcctgggcgaaggcggtgcggccgggacgtat
ctggcggtggacaagatcctcgccatcgccaacgccagcggcgccaaagccattcatccc
ggctacggctttctctctgaaaacgccggctttgcccaagcctgtgaggacgccggtatc
gccttcgtcggcccgacgcccgagcaactacgcgtattcggcctcaagcacaccgcccgc
gcgctggcccgacaacacggcgtgccgctgctggaaggcaccgaactgctcgacagcctg
gaagccgccatcgcagccgcgcgcagcattggctatccggtgatgctcaaaagcactgca
ggcggtggcggcatcggcatgcgcgtgtgccgcagcgccgaagagctggcggactcgttc
gaggccgtcaaacgcctcggccagaacaatttcagcgacgcgggtgtattcatcgagaaa
tacatccagcgcgcccgccatctggaagtgcaggtgttcggtgatggtcagggcgacgta
ctggccctcggcgtgcgcgactgctcggtacagcgccgcaaccagaaagtgctggaagaa
accccggcgcccaacctgccggacagcatggccgatgagctgtgcgcggcggccatcaag
ctggccagagcggtcaactatcgcagcgccgggaccgtcgagtttgtgttcgacagcgaa
gaccagcgcttttattttctggaagtgaacacgcgcctgcaggtcgagcatggtgttacc
gagcaggtgtggggtgtcgatctggtcagttggatggtgcaactggccgctggtgatctg
ccgccgctcgatcagttgcaggccggtttgaagccggtcggccatgccattcaggcgcgg
ctgtacgccgaggatccgggccgtgacttccagccctgccccggcctgctgaccgctgtc
agctttccgcctgccgatggccgtgggctgcgcattgatacctgggtggaagccggttgc
gagatcccgccgtatttcgatccgatgatcgccaagctgatcagttgggcgccgaaccgc
gatcaggccagcgccgggctggctgccgcacttcatgaaacgcgcctgtatggcgtggag
accaaccgcgattacctgcgccagatcatcgacgatacacctttcgccagcggtcagccg
tggacgcgctgcctggaaggtctggtgtatcacgctgatacatttgaagtgctgagcggc
ggaacgcaaaccagcgtgcaggattatcccggtcgactgggttactgggcggtcggtgtg
ccgccgtccgggccgatggacagccgcgccttgcgtcagggcaaccggctgctgggcaat
gccgaaggctgcgccgcgctggaaatcaccatgagcgggccgctgctgcgcttcaacacc
gatgcggtgatcgccgtgaccggcgcgcagatcccgatcgcactggacggcgaatcctgc
gccatgaacaccgcgttactggtgcgcgcagggtcgaccttgtcgctgggcactatcgcc
ggggcaggcgtgcgcagttacctgtgcgtgcgcggcgggctggacgtgccggattacttg
ggcagcaaaagcaccttcaccctcggccagttcggcgggcatggcggccgggcgttacgc
gccggtgacgtgctgcatatcgcgcccttggttgaccgcaatgcgggccagcggattgcc
gatgaagagcttgatgagctgaaagaggttcgccagattcgagtgatctacggcccgcac
gccgctccggaatacttcaccgaagcgtatatcgagaccttttttgctaccaactgggag
gtgcatttcaactccagccgcaccggcgtacgcctgatcgggcccaagccggaatgggtg
cgtgcggatggcggcgaagcgggtctgcacccgtccaacatccacgacaacccatatgcg
atcggcgcggtggattttacgggcgacatgccggtgatccttggcccggatggcccgagc
cttggcggctttgtatgcccggtgaccatcatcgaagcggacttgtggcaactggggcag
ttgaaggctggagaccgggtgcggttttatccagtgagtgtcgagtcgtgtcacgcggcg
atgaacctacaaggctccacatacaactgtgggagcgggccgggcgacgcttcgcttgct
cgcgaaggcaatagttcagacacagaaaacacatcagatgtactggcccattcgcggaca
agtccgctcccacaaggccccatacacccctgtgggagcgagcttgctcgcgaaggcaat
agttcagacacagaaaacacatcagatgtaccggcccattcgcggacaagtccgctccca
caaggccccatacacccctgtgggagcgagcttgctcgcgaaggcaatagttcagacaca
gaaaacacatcagatgtactggcccattcgcggacaagtccgctcccacaaggctccaca
tacaactgtgggagcgagcttgctcgcgaaagcaatcttccagacacagaaaatacatca
gatgtaccggcctcttcgcgagcaagctcgctcccacaaggccccatacacccctgtggg
agcgagcttgctcgcgaaggcgatattccagacacagaaaatacatcggatgtaccggcc
cattcgcggacaagtccgctcccacagggccccatacacccctgtgggagcgagcttgct
cgcgaaggcgatattccagacacagaaaatacatcagatgtaccggcctcttcgcgagca
agctcgctcccacaaggtgtcggctcgttcctacataagttgcccagcccgatcattctc
gacatcggtcaggccgacaaacgcctcgttgcgcggctgtcgggcgacacccatctactg
ctggaaatcggtgcgcccgagctggatctggtgctgcgcctgcgcggccatgccttgatg
ctggcgctggaagcccaaccgctggcgggcgtgatcgacctgacgccgggcattcgctcg
ctgcaagttcactatcgccccgagcaactgccgcttaggcgactgctcgacattattgct
ggcgaatgggatgccgtgtgcgcggcgaaagacctgcacgtcgcctcacgcatcgtccac
ctgcccctttcctgggatgacccggcttgccagctggccatcgagaaatacatgaccacc
gtgcgcaaggacgcgccgtggtgcccgagcaacctggagttcatccgccgcatcaatgac
ctgcccaacctcgacgaagtacaacgcacggtgttcgacgccagctatctggtcatgggc
ctgggcgacgtctacctcggtgcgccggtcgccaccccgctggacccgcgccatcgcttg
gtgaccaccaagtacaacccggcacgcacctggacagcggagaactcggtcggcatcggt
ggcgcttacatgtgcgtgtacggcatggaaggccccggcggttatcaattcgtcggccgc
acgttgcagatgtggaaccgctatcgcgaagtggccgcattcgaaggcaaaccctggctg
ctgcgtttcttcgatcagattcgcttctacccggtcagcgccgacgaactgctgcgcatc
cgccgtgactttccgctcggccgctttgcactgaacatcgaacacagcaccctgaacctg
accgattaccaggccttcctgacccgcgaaaccgacggcatcgcagcatttcgagcccag
caacaatcggccttcaacgctgaacgcgaacgctggatcgccaacggccaggcagacttc
cagaatgacgaaggcgctgcgcccagcagcgaagagttgcccttgcagccaggccagcaa
ggcatcgacagccatatcgcaggcaacctctggcaagtgcaggtgcaacccggtgagcgg
gtcgaagcgggtgatgtgctggtgattctggagtcgatgaaaatggaaatcccgctcctc
gcaccggtcggcggcgtggtgcaggaagtcagggtgcaacccggctcggcggtccgcgca
gggcagcgggtcgtggtgctggcagcagactga
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