Pseudomonas cannabina pv. alisalensis: JGS08_20780
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Entry
JGS08_20780 CDS
T07379
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JGS08_20780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcab03032
]
JGS08_20780
Enzymes [BR:
pcab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
JGS08_20780
DNA replication proteins [BR:
pcab03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JGS08_20780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
nSTAND3
MMR_HSR1
AAA_18
AAA
nSTAND6
AAA_30
Viral_helicase1
NB-ARC
AAA_17
SLFN-g3_helicase
KTI12
AAA_28
AAA_22
TIP49
AAA_19
AAA_33
AAA_16
ABC_tran
SRPRB
ATPase_2
Zeta_toxin
NACHT
6PF2K
NPHP3_N
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QQN21013
LinkDB
All DBs
Position
complement(4645498..4646877)
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AA seq
459 aa
AA seq
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MSRELYSLEAEHGLLGALLLDASLFDAITARITTADFAYDDNAALYQAIIDTHAAGQMID
VVTVGVEHPELPSGERTLAYASEIAKNIPSTANWAGYQRIVLERSALRRVVEVAEVIKDS
ASESLPVADIIALAQQATADLRDLGAPDRKDYYKYSEVLTPVIDGIDSRFNGAKQLGYSS
GLKDLDDLIRGLRNKNMIVIAGLPGSGKTTLGVQIAQHIACVDKGVGLIVSMEMTKEELV
TRGIASVGGVSLTRLDEGHTIQDEDWPKITSAVNVLANSKLFVCDEEGMTAARIRSTARQ
VQRKEGLSIVVVDYIGLIAAEGAGQNRTLELGKISTALKNMAKELDVPVIVLAQLNRGST
NRTDKKPRPSDLRDSGQIEADADVVILVHRDPDSEEGQNGVTELIVGKCRHAKTGSCMVQ
QQGQFVRFVDFAGNPRATDEEVEMGRTSFASRFNRGSQS
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgaactttacagccttgaggctgagcatggccttctgggcgcgctgctgctg
gacgcttccctgttcgacgctatcaccgcccggatcacgacggccgacttcgcctacgac
gacaacgccgcgctttaccaagcgataatcgacacacacgccgctggccaaatgatcgat
gtggtgacggtgggcgtcgagcacccggagctacccagtggtgagcgaaccctggcttac
gcgtcagaaatcgccaagaacatcccgagcacggcgaactgggcagggtatcagcgcatc
gttctggagcgctcagccctgcgccgggtggttgaggttgcggaggtgatcaaggattcg
gccagcgaaagcttgccggtcgccgacatcatcgcgctagcccagcaggcaacagcggat
ctacgcgacctgggcgcacccgaccggaaggattactacaaatacagcgaggtgctgacc
cccgtaatcgatggcatcgacagtcgattcaacggcgcaaaacagctcgggtactcaagc
ggcctaaaggatttggacgacctgatccgtggtctgcgcaacaaaaacatgattgtgatc
gccggcctgccgggctcaggcaaaacaacgctgggcgtgcagatcgcccagcatattgca
tgcgtcgacaagggtgtcggtctcatcgtctcgatggagatgaccaaggaagaacttgtc
acgcgcggcattgcatccgtgggaggcgtaagccttacgcgccttgatgaaggtcacacg
attcaggatgaagactggccgaagatcaccagtgccgtgaacgtgttggcgaactcgaaa
ctgttcgtctgcgatgaggagggcatgaccgccgcccgcattcgctcgacagccaggcag
gtgcagcgcaaggaagggctcagcatcgtggtggtggactacatcggcctgatcgccgcc
gagggcgctggtcagaaccgaacgctcgagctgggcaagatatccacagcgctcaagaac
atggccaaggagctggacgttccggtgatcgttctggcgcagctcaatcgcggatcaacc
aaccgcacggacaagaagccgcgcccaagcgacctgcgcgactcgggccagatcgaggcc
gacgccgacgtggtgatcctcgttcatcgtgacccggatagcgaggaagggcagaacggt
gtcaccgagctgatcgtgggcaaatgccgccacgccaaaacggggtcgtgcatggtccag
cagcaagggcagtttgtccgcttcgtggacttcgccggtaatccacgcgcaacagacgaa
gaggtcgagatgggccgcacgtcattcgccagtcgcttcaatcggggtagccagtcatga
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