KEGG   Pseudomonas cannabina pv. alisalensis: JGS08_20955
Entry
JGS08_20955       CDS       T07379                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pcab  Pseudomonas cannabina pv. alisalensis
Pathway
pcab02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pcab00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    JGS08_20955
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pcab02022]
    JGS08_20955
Two-component system [BR:pcab02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   JGS08_20955
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 AAA HTH_8 AAA_2 MCM
Other DBs
NCBI-ProteinID: QQN21042
LinkDB
Position
4675948..4677282
AA seq 444 aa
MLNSVIVVDDEAPIRQAVEQWLSLSGFEVQVFARAEECLNSLPEHFPGVILTDVRMPGMS
GLELLSRLHELDRDLPVILLTGHGDVPMAVEAMREGAYDFLEKPFSPETLISNLRRALEK
RQLVLENRRLHEQADARTRLDATLLGTSPSLQTLRRQVLELSQLPVNVIIRGETGSGKEL
VARCLHDFGPRAGKPFVALNCAAIPEHLFEAELFGHESGAFTGAQGKRIGRLEYADGGTV
FLDEIESMPMAQQVKLLRVLQDKRLERLGSNQSIEVDLRIIAATKPDLLEEARAGRFRED
LAYRLNVAELRLPPLRERREDIPQLFGHFARTSAERLNRDAPTLSAARLSQLLSHDWPGN
VRELANAAERQALGLELTPSEPDSPAQGQSLATRQEAFEAQCLRTSLTLHKGDIKAVLSE
LQLPRRTLNGKMQRHGLTREMFLN
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgttgaactcggtcatcgtggtagacgacgaagcgcccatccggcaagccgtcgaacag
tggctgagcctgtcgggtttcgaggtgcaggtgtttgcccgcgctgaagaatgcctgaac
agcctgccggaacactttcccggcgtgatactgaccgatgtgcgcatgccgggcatgagc
gggctggagctgttgagccgactgcatgaactggaccgggacttgccggtcattctgctg
accgggcatggcgacgtgccgatggcggtcgaggccatgcgcgaaggcgcgtatgacttt
ctggaaaagccgttcagccctgaaaccctgatcagcaacctgcgccgcgccctggaaaaa
cgccagttggtgctggaaaaccggcgcctgcatgagcaggctgacgcccggacacgcctc
gacgctaccctgcttggcacttcgcccagcctgcaaaccctgcgccggcaggtgctggag
ctgtcgcaactgccggtcaatgtgatcatccggggcgaaacaggcagtggcaaagaactg
gtcgcccgctgtctgcatgacttcggcccgcgcgcaggcaaacctttcgtggcactcaac
tgcgcggccatcccggaacacctgttcgaagccgaactgttcggccacgaaagcggcgcg
tttaccggcgcgcaaggcaagcgcatcgggcgcctggagtacgccgacggcggcactgtg
tttctcgatgaaatagaaagcatgccgatggcgcaacaggtcaagctgctacgcgtgctg
caggacaagcgcctggagcgattgggctcgaatcagagcatcgaggtcgacctgcggatc
attgcggcgaccaagcctgatctgcttgaagaggcacgcgccgggcgctttcgggaagac
ctcgcgtatcgcctgaatgtagccgaactgcgcttgccgcccttgcgcgaacgccgggaa
gacatcccgcaactgttcggccatttcgccagaacctccgccgaacgtctgaaccgcgac
gcgcctaccctcagtgccgcgcgcctgagccagttgcttagtcatgactggcccggcaac
gttcgcgagctggccaatgcggccgagcgtcaggcactcggcctggagctgacgccttcc
gagcctgacagcccggcgcaggggcaatcactggccacccgtcaggaagcgttcgaggcg
caatgcctgcgcacctcgctgacccttcataaaggcgatatcaaggccgtgctgagcgaa
ttgcaactgccgcgccggaccctgaacgggaagatgcagcgtcatggcctgacgcgggaa
atgtttctcaactga

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