Pseudomonas cannabina pv. alisalensis: JGS08_21065
Help
Entry
JGS08_21065 CDS
T07379
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcab03400
]
JGS08_21065
DNA repair and recombination proteins [BR:
pcab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
JGS08_21065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
FtsK_SpoIIIE
DUF87
AAA_22
ResIII
AAA_16
TrwB_AAD_bind
AAA_30
AAA_10
Hydrolase
T2SSE
nSTAND_NTPase5
CbiA
AAA_7
AAA_6
Zot
nSTAND3
SRP54
AAA_19
TraG-D_C
AAA_28
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QQN21061
LinkDB
All DBs
Position
complement(4705312..4706799)
Genome browser
AA seq
495 aa
AA seq
DB search
MRDSLEIVLGADPAGRPVSQALRLANRHGLIAGATGTGKTVTLQRLAEAFSDAGVAVFAA
DIKGDLCGLGAAGNPQGKIAERIAGMPWLAHSPQGYPVTLWDIDGKSGHPLRTTLSEMGP
LLLGNLLELTDSQQAALYAAFKVADSEGLLLLDIKDLKALLNHLRDNPQLLGEDSALMTT
GSSQALQRRLAVLEQQGAEALFGEPALQLEDILQPASDGRGRIHLLDASRLVHEAPKVYA
TFLLWLLAELFEQLPERGDADKPLLALFFDEAHLLFANTPKVLQERLEQVVRLIRSKGVG
VYFVTQSPSDLPDAVLAQLGLRIQHGLRAFTAKEQKSLRAVADGFRPNPDIDALSVLTEL
GTGEALVGTLQDKGTPAMVQRVLIAPPQSRIGPLSESERASLISQSTLGQRYSKPVDRES
AYEMLSARKVDAPEQQNADVTKSAQEESFSDKAGEFLGGLAGQAMKNVMRQAANRLGREL
VRGLMGSLLGSKKRK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgactctctggaaatagtcctgggtgccgaccctgccgggcgacccgtttctcag
gcgcttcgcctggccaaccgtcatgggctgatcgccggtgcgactggcaccggcaagacc
gtcaccttgcagcgcctggccgaggctttcagcgatgcgggcgtcgcagttttcgccgct
gatatcaaaggtgacttgtgcggcctcggagctgctggcaatccgcaaggcaagattgcc
gaacgcattgccggcatgccctggcttgcgcacagccctcaagggtatccggtcacgttg
tgggacattgatggcaagtctggtcatccattgcgcaccacgttgagtgaaatgggaccg
ttactgctcggtaatttgctcgagttgaccgacagccagcaagcggccctgtatgcagcg
ttcaaggtggcggatagtgaaggtctgttgttgctcgatatcaaagacctcaaagcgctg
ctcaatcatttgcgtgacaatccgcaattgctgggcgaagacagcgcgctgatgacaacc
ggttccagccaggcccttcagcgtcggctggccgtgctggagcagcagggcgccgaagcc
ttgtttggtgagcccgcgctacagctcgaagacattcttcagcccgccagcgatgggcga
gggcgcattcatctgctcgacgccagccgtctggttcatgaagcgccgaaggtgtacgcg
acttttctgctgtggctgctggctgagttgttcgagcagttgcctgagcgcggcgatgcc
gacaaaccgctgttggcgttgttcttcgatgaggcccatttgctgtttgccaatacgccg
aaagtgcttcaggaacggcttgagcaagtcgttcgcctgattcgctccaaaggtgtgggc
gtctatttcgtgacccagtcgccaagtgatttgcctgatgcggtgcttgcccagcttggc
ttgcgcatccagcacggtttgcgtgcgtttacagccaaagaacagaaatcgctgcgcgcc
gtggccgacggttttcggcctaatcctgatatcgatgccttgagtgtgctgaccgagctg
ggcaccggtgaagcactggtcggcacgttgcaggataaaggcacgccggcgatggttcag
cgcgttctgattgcaccgcctcaatcacgtatcgggccgctcagcgagagtgagcgcgcc
agtctgatcagtcagtccacgctgggtcagcgttacagcaagccggtggacagagagtct
gcctatgaaatgctcagcgcccgcaaggtcgacgcgcctgagcagcagaatgcggatgtc
acgaaaagtgctcaggaagagagtttcagcgacaaggccggagagtttctgggtggcctg
gccgggcaggcgatgaaaaacgtgatgcgtcaggccgccaaccgacttgggcgtgagttg
gtgcggggtttgatggggtcgttgctgggcagtaaaaagcgcaagtaa
DBGET
integrated database retrieval system
