Pseudomonas cannabina pv. alisalensis: JGS08_21355
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Entry
JGS08_21355 CDS
T07379
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JGS08_21355 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcab03019
]
JGS08_21355 (groL)
03110 Chaperones and folding catalysts [BR:
pcab03110
]
JGS08_21355 (groL)
03029 Mitochondrial biogenesis [BR:
pcab03029
]
JGS08_21355 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcab04147
]
JGS08_21355 (groL)
Enzymes [BR:
pcab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
JGS08_21355 (groL)
Messenger RNA biogenesis [BR:
pcab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
JGS08_21355 (groL)
Chaperones and folding catalysts [BR:
pcab03110
]
Heat shock proteins
HSP60 / Chaperonin
JGS08_21355 (groL)
Mitochondrial biogenesis [BR:
pcab03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
JGS08_21355 (groL)
Exosome [BR:
pcab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
JGS08_21355 (groL)
Exosomal proteins of other body fluids (saliva and urine)
JGS08_21355 (groL)
Exosomal proteins of breast cancer cells
JGS08_21355 (groL)
Exosomal proteins of colorectal cancer cells
JGS08_21355 (groL)
Exosomal proteins of bladder cancer cells
JGS08_21355 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Lar_N
Motif
Other DBs
NCBI-ProteinID:
QQN21112
LinkDB
All DBs
Position
complement(4768457..4770100)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKEVKFGDAGRKKMLAGVNVLADAVKATLGPKGRNVIIEKSFGAPLITKDGVSVAKEI
ELKDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKATIAIVAQLKLLSKPCTDTKAIAQVGTISANSDHSIGDIIAEAMEKVTKDGVITVEEG
SGLDNELSVVEGMQFDRGYLSPYFINKPDTMVAELDSPLLLLVDKKISNIREMLPVLEAV
AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEIGLSLETTTLEHLGNAKRVILNKENTTIIDGAGVKTDIDSRISQIRQQIGDTSSDY
DKEKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RSLQAIEGLKGDNADQDVGIALLRRAVEAPLRQIVANSGDEPSVVVDKVKQGSGNFGYNA
ASGEYGDMIEMGILDPAKVTRSALQAASSIASLMITTEAMIADVPEDKPAGGGMPDMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagttaagttcggcgatgctggccgtaaaaaaatgctcgccggtgta
aacgtcctggctgacgcagtaaaagcgaccctgggcccgaaaggccgtaacgtcatcatc
gaaaaaagctttggcgctccgctgatcaccaaagacggtgtgtcggttgccaaggaaatc
gagctcaaagaccgtttcgaaaacatgggcgcgcagctggtcaaagacgttgcctcccgt
gccaacgatgacgccggtgacggcaccacgactgctaccgttctggctcaggctatcgtc
aacgagggcctgaaggctgtcgctgccggcatgaacccgatggacctgaagcgcggcatc
gacaaggcaaccatcgccattgttgctcagctgaagctgctgtccaagccgtgcaccgat
accaaggcaattgcccaggtaggcaccatctctgccaactcggatcactccatcggcgac
atcattgccgaagccatggaaaaagtgaccaaagacggcgttatcaccgttgaagaaggt
tcgggtctggacaacgagctgtctgttgtagaaggcatgcagtttgaccgtggctacctg
tccccgtacttcatcaacaagccggacaccatggttgccgagctggacagcccgctgctg
ttgctggttgacaagaagatctccaacattcgcgaaatgctgccggttctggaagcagtc
gccaaggctggtcgtccgctgctgatcgttgctgaagacgttgaaggcgaagcgctggca
actctggttgtcaacaatatgcgcggtatcgtgaaagttgcagccgtcaaggcgccaggt
ttcggcgaccgtcgcaaggccatgctgcaggacatcgctgttctgactggcggtaccgtc
atctccgaagagatcggtctgagcctggaaaccactaccctggaacacctgggtaatgcc
aagcgcgtcattctgaacaaagaaaacaccaccatcatcgatggtgctggcgtcaaaacc
gatatcgactcgcgcatctcccagatccgtcagcagatcggcgacaccagctcggactac
gacaaggaaaaactgcaagagcgtctggccaagctgtcgggcggcgttgcagtgatcaag
gtcggtgccggttccgaagttgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgcaacccgtgcagccgttgaagaaggcgtggtacctggcggtggcgtagcactggtt
cgctcgctgcaggccatcgaaggtctgaaaggcgacaacgccgatcaggacgtcggtatc
gctctgctgcgtcgtgcagtcgaagcgcctctgcgtcagatcgttgccaactccggcgac
gagccaagcgtggttgtcgacaaggtcaagcagggttcgggtaacttcggttacaacgct
gcttccggcgaatacggcgacatgatcgaaatgggtatcctcgacccggccaaagtgact
cgctctgccctgcaggcggcgtcctccatcgccagcttgatgatcaccaccgaagcgatg
atcgctgacgtgcctgaagacaagccagcaggcggcggcatgccggacatgggcggtatg
ggtggtatgggcggcatgatgtaa
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