Pseudomonas cannabina pv. alisalensis: JGS08_21535
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Entry
JGS08_21535 CDS
T07379
Symbol
rsmI
Name
(GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcab03009
]
JGS08_21535 (rsmI)
Enzymes [BR:
pcab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
JGS08_21535 (rsmI)
Ribosome biogenesis [BR:
pcab03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JGS08_21535 (rsmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
DUF4213
Motif
Other DBs
NCBI-ProteinID:
QQN21145
LinkDB
All DBs
Position
complement(4806849..4807721)
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AA seq
290 aa
AA seq
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MTVPVVSNSTPGSLYVVATPIGNLDDMSVRALKVLREVALIAAEDTRHSARLMQHFGIST
PLAACHEHNERDEGSRFITRLLAGDDVALISDAGTPLISDPGYHLVRQARAAGVPVVPVP
GACALIAALSAAGLPSDRFIFEGFLPAKAIGRRAKLELVKEEPRTLIYYEAPHRILECLQ
DMELVFGAERHALLAREITKTFETLKGLPLGELRAFVEADSNQQRGECVVLVSGWTPPAD
EDVVGAEARRVLDLLLEEMPLKRAAAVAAEITGVRKNLLYQVALDKQKGE
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
ttgactgttccggttgtttcgaattccaccccgggctcgctttatgtcgtggcgacccct
atcggcaatctggacgatatgagcgtgcgggcgctgaaagtgctgcgcgaagtcgcgttg
attgcggcagaagatacgcgtcattcagcacgcctgatgcaacacttcggtatatcgacg
ccgctggccgcctgccacgagcataacgagcgtgatgaaggtagtcggtttatcacgcgg
ctgctggcgggcgacgatgttgcgctgatttccgatgcgggcacaccgctgatctccgat
cccggctatcacctggttcgccaggcgcgtgccgccggtgtgccggtcgttccggtgccg
ggcgcctgcgctctgattgccgctttgtctgcggcggggctgccttctgatcgtttcatc
ttcgaaggctttcttccggcgaaggcgattggccgtcgggcaaagctcgagctggtaaag
gaagagccgcgcacgctcatctactacgaggcgcctcatcgaatcctggaatgcctgcag
gatatggagctggtcttcggtgccgagcggcatgccttgctggcgcgtgaaataaccaaa
actttcgaaacgctcaagggtctgcctttgggtgagcttcgggcttttgtcgaagccgac
agcaatcagcagcgcggcgagtgtgtggtgctggtgtccggctggacaccgcctgcggac
gaagatgtcgtgggggctgaagcgcgcagggtgctagatctgctgctcgaagagatgccg
ctcaagcgtgcagctgctgtggcggccgagataaccggggtgcgcaagaacctgctttat
caggtggcgctggacaaacagaagggcgaataa
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