KEGG   Pseudomonas cannabina pv. alisalensis: JGS08_21715
Entry
JGS08_21715       CDS       T07379                                 
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
  KO
K06958  RNase adapter protein RapZ
Organism
pcab  Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:pcab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcab03019]
    JGS08_21715 (rapZ)
Messenger RNA biogenesis [BR:pcab03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     JGS08_21715 (rapZ)
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_18 AAA_29 AAA_16 T2SSE AAA_22
Other DBs
NCBI-ProteinID: QQN21180
LinkDB
Position
4838718..4839575
AA seq 285 aa
MRMIIVSGRSGSGKSTALDVLEDSGFYCVDNLPAGLLPELAERALINTELAEPLLAVSID
ARNLPSHLTRFPQMLDEVRSRNIQCDVLYLDADEATLLKRFSETRRRHPLSTSDRSLAEA
IRDETTLLGPIIDLADLKINTTHLNLYQLRDALKLRLLNKPEPGTAFLLESFGFKRGMPV
DADLVFDVRCLPNPYWKPELRDHSGLEQPVIDYLSVQPDVEEMFQDIFSYLNKWLPRFAA
SNRSYVTIAIGCTGGHHRSVYLTERLGQVLQQSLKNVQVRHRDLS
NT seq 858 nt   +upstreamnt  +downstreamnt
atgcgcatgatcatcgtcagcggccgctccggctcgggtaaaagcacagcactggatgta
ctggaagacagcggtttctattgcgtcgacaaccttcctgccggcctgctgccagaactg
gcagaacgcgcactgatcaataccgagctggcagaaccgctgctggcggtgtcgatcgat
gcacgcaatctgccaagccatctgacccgtttcccgcaaatgctggatgaggtgcgctca
cgcaacattcagtgtgatgtgctctatctggatgcggacgaagcaacgctgctcaagcgt
ttctcggagacccggcgtcgccacccgttgagcacgtcggatcgttcgctggccgaggcc
atacgcgacgagaccacactgctcggcccgatcatcgatctggccgacctcaagatcaac
accactcacctgaatctctaccagctgcgcgacgcactgaaattgcgcctgctcaacaag
cccgagccgggcaccgcgtttctgctcgagtcgttcggtttcaagcgcggcatgccggtc
gatgccgacctggtattcgatgtgcgctgtctgcccaatccctactggaagcccgagctg
cgcgatcactcaggccttgagcagccagtgatcgattacctgtctgtgcagcccgacgtt
gaagagatgtttcaggacattttctcgtatttgaacaaatggctgccacgattcgcggcc
agtaaccgttcttacgttaccattgccatcggttgcacgggcgggcaccaccgctccgtc
tacctgacagaacgcctgggtcaggtattgcaacaatcactcaagaacgttcaggtccgc
caccgggaccttagctga

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