Pseudomonas cannabina pv. alisalensis: JGS08_22320
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Entry
JGS08_22320 CDS
T07379
Name
(GenBank) ABC transporter substrate-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02010
ABC transporters
pcab02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JGS08_22320
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
JGS08_22320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_22320
Transporters [BR:
pcab02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
JGS08_22320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QQN21282
LinkDB
All DBs
Position
4979651..4981258
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AA seq
535 aa
AA seq
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MGHTLFKPLLLTGALLACAPMAQAASTLVYCSEASPAGFDPSQYTSGTDFDASAETVFNR
LTQFKRGGTEVEPGLATRWDVSPDGLTYTFHLRDGVKFHTTDYFTPTRTFNADDVLFTFN
RLLDANHPFRKAYPSESPYFTDMGLNTTIKSVEKVDPQTVRFTLNNIDAALVQNLAMSFA
SIQSAEYADQLLKEGKAEELNQKPIGTGPFVFKRYQKDSQIRYVGNTDYWKPEDVKIDNL
IFSISSDAAVRMQKLKAGECQVSGYPRPQDIEEMKKDPKLKVLSQPGFNLGFLAYNVTHA
PLDQLKVRQALDMAIDKPAIIKAVYQSAGQLAENALPPGQWSYDPTIKDAPHDVTKARQL
LKEAGVAPGTKIDLWAMTVQRASNPNARMSAQMIQSDWEKIGIKANIVSYEWGEYIKRAK
AGEHDAMIYGWTGDNGDPDNWLGVLYSCAAVKGSNYAKWCDPAYDKLVQQAKITTNRDER
IKLYQQAQHILKQQVPITPIANSRVFQPMRQEVQDFKISPFGLTPFYGVSLGTAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgggacacacacttttcaaaccgctgctcctgactggcgcactgctggcctgcgcacca
atggcccaggcggcgagcactctggtgtattgctccgaagccagcccggccggtttcgac
ccgagtcagtacaccagcggcactgacttcgatgcctctgccgagactgtcttcaaccga
ctgacccagttcaagcgcggcggaaccgaagtagagcccgggctggctacccgctgggat
gtgtcacctgacggattgacgtacacgtttcacctgcgcgatggcgtgaaattccatacc
acggattatttcacgccgacccgcaccttcaacgccgacgatgtgctgttcactttcaat
cgcctgctcgatgccaatcacccgttccgcaaggcctacccgtcggagtcgccgtacttc
accgacatgggcctgaacacgacgatcaagagcgtcgagaaagtcgatccgcagaccgtg
cgctttacgctgaacaacattgatgcggcgctcgtacaaaacctggccatgagctttgcc
tccattcaatccgccgaatacgcagaccaactgctcaaggaaggcaaagcggaagagctg
aaccagaagccgatcggcaccgggcctttcgtgttcaagcgttaccagaaggactcgcag
atccgctacgtcggcaacaccgactactggaagcccgaggatgtgaagatcgacaacctg
atcttctcgatcagcagcgatgccgccgtgcgcatgcagaagctcaaggccggtgagtgc
caggtcagcggttatccacgcccgcaggacatcgaagagatgaaaaaggaccctaagctc
aaggtcctgagtcagccaggcttcaacctgggttttctggcctacaacgtgacccacgcg
ccgctcgatcaactcaaggttcgtcaggcgctggacatggccatcgacaagccggccatc
atcaaggcggtctaccagagtgcaggccagttggccgaaaacgccctgccgcctggccag
tggagctacgacccgacgatcaaggatgcgccacacgatgtgaccaaggccagacaactg
ctcaaggaagcaggtgtggcaccggggacgaagatcgatctgtgggccatgaccgttcag
cgcgcctccaatcccaatgcgcgcatgtctgcgcagatgattcagtccgactgggagaag
atcgggatcaaggccaacatcgtcagctatgaatggggcgagtacatcaagcgcgccaag
gccggcgagcatgacgcaatgatctacggctggaccggtgacaatggtgaccccgacaat
tggctcggtgtgctctatagctgcgcagccgtcaaaggcagcaactacgcgaaatggtgc
gatccggcttatgacaagctggtgcagcaggccaagatcacgaccaaccgcgatgaacgc
atcaagctctatcagcaagcccagcacatcctcaagcagcaagtgccaatcaccccgatt
gccaattcccgggtgtttcagccaatgcgtcaggaagtgcaggacttcaagatcagtcct
ttcggtctgacgcccttctacggtgtcagcctgggaacagcaaagtaa
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