Pseudomonas cannabina pv. alisalensis: JGS08_22340
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Entry
JGS08_22340 CDS
T07379
Name
(GenBank) ABC transporter substrate-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02010
ABC transporters
pcab02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JGS08_22340
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
JGS08_22340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_22340
Transporters [BR:
pcab02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
JGS08_22340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
QQN21286
LinkDB
All DBs
Position
4986642..4988237
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AA seq
531 aa
AA seq
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MKLLSLRASIAIALLSAAATVSAKPLVVCTEASPEGFDIVQYSTAVTADASAETILERLV
AFTPGTTDTVPGLAESWDISPDGLTYTFKLRKGVKFHTTDYFKPTRDMNADDVVWSFKRQ
LDPKHPWHALSLVGYPYFESMGFQDLLKDVEKVDDSTVKFTLAHPESPFLRDLAMPFTSI
YSAEYADQLLKNNKTAEFNSKPIGTGPFILTRYAKDAQVRYKANPDYWKGKVPSETLIFA
ITLDNNTRLQKLKANECQVALYPKPDDIANIKADPNLKIDEMESMMTSYVAINTSHKYLS
DVRVRQAINLAFDKKSYIRALFGEGKATEGVGPYPPTMMGYDTDSKSPAYDPDKARALLK
EAGVPEGQVFTLFARNGGAVTNPNPMVGAQMLQSDMAKVGIKIDIRIMEWGEMLKRAKNG
EHDMVFAGWAGDNGDPDNFLTPNLSCDAAKNGENYARWCNKAFEDAITQARKITEPAERA
ALYKQAQQVFNHEQPWISLAYPKLFVAMRKDVEGFQISPLTNNNFTTTRVK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
ttgaaactgctatcgctccgcgcgtcgattgccattgcgctgctcagcgccgccgcaacc
gtttcggccaaaccgctggtggtctgcaccgaggcgagtcctgaaggtttcgatatcgtg
cagtattcgactgccgtcacggcagatgcctcggccgaaaccattcttgaacgcctggta
gccttcactccaggcactactgatactgtaccgggcctggctgaaagctgggacatcagc
cccgacggtctgacgtacaccttcaaactgcgaaaaggcgtcaaattccacaccaccgac
tacttcaagcccacccgcgacatgaatgccgacgacgtggtctggagcttcaagcgccaa
cttgaccccaagcatccgtggcacgcactttcgctggtcggctacccctatttcgaaagc
atgggcttccaggacttgctcaaagacgtagaaaaagttgacgactccaccgtcaagttc
acccttgcgcaccccgagtcgccattcctgcgtgatctggcaatgccgttcacctcgatt
tattccgccgaatacgccgatcagttgctcaagaataacaagaccgccgaattcaacagc
aaaccgattggcaccggcccgttcatcctgactcgctatgccaaagacgctcaggtccgc
tataaagccaacccggattactggaaaggcaaagtgccgagtgaaacgctgatatttgcc
atcactctggacaacaacacacgcctgcaaaagctcaaggcgaatgaatgtcaggttgcg
ctttacccaaaacctgacgatattgccaacatcaaggctgaccccaatctcaagatcgac
gagatggagtccatgatgaccagctacgtggccatcaacacctcgcacaaatacctgagc
gatgtgcgtgtgcggcaagcgatcaatctggccttcgacaagaagtcctacatcagggcg
ctgtttggcgaaggcaaggccactgagggtgtcggcccgtatccaccgaccatgatgggt
tatgacaccgacagcaagagtcccgcatacgatcctgacaaggcccgtgcactgctcaag
gaagctggagtacccgagggccaggtattcaccctgtttgctcgaaatggcggcgcggtg
accaaccccaacccgatggtaggcgcacagatgcttcaatcggatatggccaaggtcggg
atcaagatagacattcgcatcatggaatggggcgaaatgctcaagcgcgccaaaaatggc
gaacatgacatggtgtttgcaggatgggctggcgacaatggcgatccggataacttcctg
acccccaacctgagctgcgacgcggccaaaaatggcgagaactatgcccgctggtgcaac
aaggcgttcgaggacgcaatcactcaagcccggaaaataaccgaaccagcggaacgtgcc
gccctctataagcaggctcaacaagtgttcaatcacgaacagccctggatcagcctggct
tacccgaaactgttcgttgcaatgcgcaaagatgtcgaaggctttcaaataagcccgctg
accaataacaacttcaccacgaccagggtgaagtag
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