Pseudomonas cannabina pv. alisalensis: JGS08_22380
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Entry
JGS08_22380 CDS
T07379
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00330
Arginine and proline metabolism
pcab00480
Glutathione metabolism
pcab01100
Metabolic pathways
pcab01110
Biosynthesis of secondary metabolites
pcab04148
Efferocytosis
Module
pcab_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
JGS08_22380
09106 Metabolism of other amino acids
00480 Glutathione metabolism
JGS08_22380
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
JGS08_22380
Enzymes [BR:
pcab01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
JGS08_22380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QQN21293
LinkDB
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Position
complement(4997631..4998794)
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AA seq
387 aa
AA seq
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MSINVEDYYSAETFKKMKAFADKQETPFVVIDTAIISKAYDDLRAGFDFAKVYYAVKANP
AVEVINLLKDKGSSFDIASIYELDKVLSCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFA
TDSEADLRNIAKAAPGSKVYVRILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVP
YGISFHVGSQQRDISVWDAAIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLE
TYAEEIIRFLKEDFGDDLPEIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVG
KFSGLIETMDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMY
WLSTGAYTTSYSAVEFNGFPPLKSFYL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcaatgtcgaagactactattcagccgaaaccttcaaaaaaatgaaggcgttc
gctgacaagcaagaaacgccgttcgtggtcattgataccgccatcatcagcaaggcctat
gacgacctgcgtgcgggcttcgatttcgccaaggtttactacgccgtcaaagccaacccg
gccgttgaagtcatcaatctgctcaaggacaaaggttcgagcttcgacatcgcctcgatc
tacgagctggacaaggtcctgagctgcggcgttggcccggagcgcatgagctacggcaac
accatcaagaaatccaaggacatccgctacttctacgagaagggcgtacgtctgtttgca
accgactccgaagctgacctgcgcaacatcgccaaggcagcaccgggctcgaaagtctac
gtgcgtatcctgaccgaaggctcgaccaccgctgactggccactgtcgcgtaaattcggc
tgccagaccgacatggccatggatctgctgattcttgctcgcgacctgggtctggtgccg
tacggcatttcgtttcatgtcggctcgcagcagcgcgacatcagcgtctgggacgcggcc
attgccaaggtcaaagtgatcttcgaacgccttaaagaagaagacggtattgttctcaag
ctgatcaacatgggtggcggcttcccggccaactacatcacccgcaccaacagcctggaa
acctacgccgaggaaatcatccgcttcctgaaggaagacttcggcgatgacctgccggaa
atcattctggagccaggccgttcgctgatttccaacgccggtattctggtcagcgaggtg
gtgctggtcgcgcgcaagtcgcgtactgcggtcgagcgttgggtctacaccgacgtgggc
aaattctccggcctgatcgaaaccatggacgaagccatcaagtttccgatctggaccgaa
aagaagggcgagatggaagaagtggtcatcgcaggccctacctgcgacagcgccgacatc
atgtacgaaaactacaagtacggcctgccactcaacctggccatcggtgatcgcatgtac
tggttgtcgaccggggcctataccaccagctacagcgcagtggaattcaacggcttcccg
ccgctgaaatcgttctacctgtaa
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