Pseudomonas cannabina pv. alisalensis: JGS08_22505
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Entry
JGS08_22505 CDS
T07379
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JGS08_22505 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcab03400
]
JGS08_22505 (recC)
Enzymes [BR:
pcab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
JGS08_22505 (recC)
DNA repair and recombination proteins [BR:
pcab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JGS08_22505 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QQN21316
LinkDB
All DBs
Position
complement(5033669..5037145)
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AA seq
1158 aa
AA seq
DB search
MPVTTSLSAGFMVVQGNRPDELRSLVVSWMRRYPLSPLENEIALVQSNGIAQWLKLALAE
DAQDEDSGGCGIAAAIDVQLPGSFMWTLYRTVLGRGEIPETSLLDKGPLTWRLMRLLPAL
INQPHFEPLQRFLTDDTDLRKRYQLSERLSDLFDQYQVYRADWLEDWAEGRHQLRDARNQ
SRPLTAANCWQAELWRALLDDVGAEGMAQSRAGVHQRFIERIGHMTEAPPGLPARVIVFG
ISSLPAQALEALAGLAKFSQVLLCVHNPCRHHWADIVADKDLLRHQYKRQARKTGMPIIL
DPQALHQHAHPLLAAWGKQGRDYINLLDSHDDPRSYRSSFKDERIDLFSEVEPANLLNQL
QDDILELRPLDETREKWPAVDPLEDRSVRFHIAHSAQREVEVLHDQLLARFSKDPALRPR
DVIVMVPDIDSYAPHIRAVFGQIDREDRRFIPFTLADQGQRGREPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRARFRIQERDLPTLHRWIEGAGIRWGLNAQQRASLGLPDALEQNS
WHFGLRRMLLGYAVGAGTAYDGIEPYDEIGGLDAALIGPLVALIDALQVAHTQLSTPTTP
EAWGARLQALLQLFFQAESEHDDYLLAQLETLRENWLETCATVGLIDELPLTVVREAWLA
GLDQGRLSQRFLAGSVNFCTLMPMRAIPFKVVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARDQLYVSWVGRSIRDNSERPASVLIGQLRDHLASGWKLAG
ETDPASPQDEGERLLKALTVQHPLQPFSARYFHAGTGYFSFAREWRLLHETDAPSPALSE
LSPHEQEEPLTIAQLQDFLRNPVKHFFSQRLKIYFEVAEAPLADEEPFVLDALERYGLSE
SLLSAAMAAPDDIDSALHTQALKLQASGLLPLAGFGTCMQDELIEPLPDVLKRYHDLLAL
WPEVLSSALPISFAHGAVSIDGWLGGLHRNANGDLLLVTAIPNSIGSKKTRKWHRLIRPW
VNHLVACACGLPLSTALVASDESLMLEPLQKDAATTTLNHLLMAWLHGMQQPLPVAVKTA
FAWLGQPADKAEAAARKAYEGDGQTSDGERRESTALARQFPDFDALMDSEEFAGWCETLY
KPIYDAPWQSLSGGEGSA
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtaacaacctccctaagcgcaggtttcatggtggttcaaggtaaccgcccggat
gaactgcgcagtctggtggtgtcctggatgcgacgttaccccttgtcaccactggagaac
gagatcgcgctggtacagagcaacggcattgcacagtggctcaagctggccctcgccgaa
gatgctcaggatgaggacagcggaggctgcggtatcgccgctgccatagatgttcagttg
cccggcagtttcatgtggacgctgtaccgaaccgttttggggcgtggtgaaatccccgag
acctcactgctcgacaaagggcctctgacctggcgtctgatgcgcttgcttcctgcgttg
atcaatcagccgcacttcgagccacttcagcgctttctgaccgacgataccgacctgcgc
aagcgctatcagctatccgagcgcctgtctgatctctttgaccagtatcaggtctatcgc
gccgattggctggaagactgggccgaagggcgccatcaattacgcgacgctcgaaatcag
tccagaccactgaccgctgccaattgctggcaggcagagctatggcgtgcgctgctcgac
gatgtcggtgccgaaggcatggcacagagccgcgcgggtgtgcatcagcgcttcatcgag
cgcattggccacatgaccgaagcgcctccaggtttgccggcgcgtgtcatcgtgttcggt
atttcctctctgccagcgcaagcgcttgaagcattggcgggcctggcgaagttcagccag
gtgctgctctgtgtgcataacccctgtcggcaccattgggccgacatcgttgccgacaag
gacttgctgcgccaccagtacaaacgtcaggcgcgcaagaccggcatgccgataatcctc
gatccgcaagcgctgcatcagcacgcccacccgctactcgccgcctggggcaagcaaggt
cgtgactacatcaacctgctggacagccatgatgatccgcgcagctatcgttcatcgttc
aaggacgagcgcattgacctgttcagcgaagtcgaacctgccaacctgttgaaccagttg
caggacgacattctcgaattgcgcccgctggatgagactcgggaaaagtggccggcagtc
gatccgctggaagaccgttcggtccgtttccacatcgcacacagtgcccagcgcgaagtg
gaagtgctgcacgaccagctcctggccaggttcagcaaagacccggccctgcgcccgcgc
gacgtgattgtgatggtcccggatatcgacagctacgcgccgcatattcgggcggtgttc
ggccagatcgaccgtgaagatcggcgcttcatccctttcacgctggcggaccaggggcag
cgcggccgtgagcctttgctgatcgcagtcgagcatttgctcaagcttcctgacagccgc
ttcccggtcagcgaaatactcgacctgctcgacgttccggcgctacgtgcgcgcttccgg
attcaagagcgcgacctgccgactctgcatcgctggattgaaggtgcgggcattcgctgg
gggctcaatgcgcaacagcgcgccagtctgggcttgcctgatgcgctggagcagaacagc
tggcatttcggtttgcgccgcatgttgctgggctacgccgtgggtgctggtacagcgtat
gacggtattgaaccctacgacgaaatcggcgggctggatgcggccttgatcggccctctt
gtggccttgatcgacgcccttcaggtggctcacacgcaattgtctacgccgaccacgccg
gaagcgtggggcgcgcgtttgcaagcgctgctgcaactgttcttccaggccgaaagcgag
cacgacgattacctgctggctcagctcgaaacgttgcgcgaaaactggcttgaaacctgc
gcaaccgtcggactgatcgacgagctgccgctgacagtggtccgcgaagcgtggctggcc
ggccttgatcaagggcgtttgtcccagcgttttctggctggctcggtgaatttctgtacg
ttgatgccgatgcgtgccatcccgttcaaggtcgtttgcctgctcggcatgaacgacggc
gactatccccgcgcgcaaccgccgctggatttcgacctgatgggcagcgattaccgtccc
ggcgaccgttcgcggcgtgaggatgatcgctatctgctgctcgaggcgctgctttcagcc
agagaccaactgtacgtcagttgggtcggccgaagcattcgtgacaacagcgagcgtcca
gcctcggtgctgattggccagttgcgcgaccacctcgccagcggctggaagctggcaggc
gaaaccgaccctgccagtccgcaggatgaaggcgagcgcttgctgaaagccctgaccgtg
cagcatccgctgcaaccgttcagtgcccgttatttccatgccggcacaggttatttcagc
ttcgcccgtgagtggcgcctgctgcacgagaccgatgcgccgtcgcctgccctgagtgaa
ctgtcaccccacgagcaggaagagccgctgaccatcgcgcaattacaggacttcctgaga
aacccggtgaagcactttttcagccagcgcctgaagatctatttcgaagtggccgaagcg
ccactggccgacgaagaaccgttcgtgctcgatgcccttgagcgttacgggctcagtgaa
agcctgctcagcgccgcgatggcagcccctgacgacatcgatagcgcgcttcatacacag
gcgctgaaactgcaagccagcggtctgttgcccctggccggtttcggtacctgtatgcag
gacgaactgatcgaaccgctgccggacgtgttgaagcgttaccacgacttgctggcgctc
tggcccgaggtactgagcagcgccttgccgatcagtttcgcccacggtgcggtgagcatc
gatggctggctgggcggtctgcaccgcaacgccaacggcgatctgttgctggtgacggcc
attcccaacagcatcggctcgaaaaagacccggaaatggcaccggctgatccgtccatgg
gtgaatcatctggtggcctgcgcttgtgggctgccattgagcacggcattggtcgccagc
gatgaaagcctgatgctggaaccgctgcaaaaagacgctgcgaccaccaccctcaatcac
ctgctgatggcttggttgcacggcatgcagcaaccgttgccggtggccgtcaaaaccgcg
ttcgcctggctgggccaacctgccgacaaagccgaagccgcggcacgcaaagcttacgaa
ggcgacggccagacctcggatggcgaacgccgcgaaagcacggcactggcccgacagttt
cctgatttcgacgcgctgatggacagcgaagagttcgcaggctggtgcgagacgctctac
aaaccgatttacgacgcgccctggcaatcattgtctggcggcgagggcagcgcatga
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integrated database retrieval system
