Pseudomonas cannabina pv. alisalensis: JGS08_22555
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Entry
JGS08_22555 CDS
T07379
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcab03000
]
JGS08_22555
Transcription factors [BR:
pcab03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
JGS08_22555
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
DUF2715
DUF6528
Motif
Other DBs
NCBI-ProteinID:
QQN21321
LinkDB
All DBs
Position
5048831..5049493
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AA seq
220 aa
AA seq
DB search
MTLEVPAHGAHVPKPASRIRQKNEEAIIQAAEDEFARHGFKGTSMNTIALKAGLPKANLH
YYFTNKLGLYVAVLSNIIDLWDSTFNHLSIDDDPAEALARYIRAKMEFSRRQPQASRIFA
MEIISGGECMSEYFSQDYRLWFQGRAAVFQAWIDAGKMDPVDPVHLIFLLWGSTQHYADF
ATQICRVTGRSRLTRQDMDQASDNLIRIILKGCGLTPPAL
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgacccttgaagtcccagcgcacggcgctcacgttcccaagcccgcaagccgtattcgt
cagaaaaacgaggaagcgattatccaggcagccgaagatgaattcgcccgccacggtttc
aagggcaccagcatgaacaccatcgccctgaaagccggactgccaaaagccaatctgcat
tactacttcaccaacaagcttggcctgtatgtcgcggtgctgagcaacatcatcgatctg
tgggacagcaccttcaatcacctcagcatcgacgacgatccggccgaggcgctggcgcgc
tatattcgcgccaagatggagttctcgcggcgtcagccacaggcttcgcggatattcgcc
atggagatcatcagcggcggcgaatgcatgagcgaatatttcagtcaggattaccgccta
tggtttcaggggcgagcagcggtttttcaagcgtggatcgatgcaggcaaaatggacccg
gtcgacccggttcacttgatcttcctgttgtggggcagcacccagcattacgccgacttc
gcgacccagatctgccgcgtgaccggacgcagccgcctgacccggcaggatatggatcag
gccagcgacaatctgatacggatcatcctcaaaggttgcgggctgacgccgccagccttg
tag
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integrated database retrieval system
