Pseudomonas cannabina pv. alisalensis: JGS08_22815
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Entry
JGS08_22815 CDS
T07379
Name
(GenBank) HlyD family secretion protein
KO
K03543
membrane fusion protein, multidrug efflux system
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_22815
Transporters [BR:
pcab02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JGS08_22815
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
CusB_dom_1
DUF3209
RnfC_N
DUF874
GAGA_bind
Motif
Other DBs
NCBI-ProteinID:
QQN21370
LinkDB
All DBs
Position
complement(5101598..5102629)
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AA seq
343 aa
AA seq
DB search
MKQHRTAISLVCSAVVLCALYSAYHILSTDAVQSTDDAYVRADSVLISARLPGQVTKVLV
DDNQAVKAGQILAELDDRDFLVARASAAATVSAAKAQLLNLQASIERQAAVIDQAAATTR
ATAASLKFAQVNQQRYLNLSNAGAGTQQERQKAESELQSWQASRDRDEASRVAATKTLDV
LKAQLEAAKAELAKDQAALSQAELNVSYTRITAPQDGMVGLRSVRVGAYVSQGQPLMAVV
PLHEAFVVANFRETQLARMVMNQAVELHVDSIPDHSFRGHIESVAPATGVSFSEIAPDNA
TGNFTKVVQRIPVKIMFEPNQADLDRLRIGMSVVASVDTTKGH
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaacacagaaccgccatcagcctggtctgctccgctgtcgtcctatgcgccttg
tatagcgcttatcacattctttccaccgacgctgtacagagcaccgacgatgcctacgtc
agagcagactcggtgctgatttctgcacgtcttccgggacaggttacgaaggtactggtg
gatgacaaccaggcggtcaaagccggccagatacttgccgaactcgatgatcgtgatttt
ctggtcgctcgagcatcggcggcagcgaccgtctcggccgccaaggcacaattattaaac
ctgcaggcgagcatcgagcgtcaggcagcagttattgatcaagctgcggccactacccgt
gcaaccgcagcatccttgaaattcgctcaggtcaaccagcagcgctatctgaacctttcg
aatgctggggcgggaacgcagcaagaacgtcagaaagctgaatcggaactgcaaagctgg
caagcgtcgcgcgaccgcgatgaggcgtcccgggttgccgcaaccaaaaccctcgatgtg
ctaaaggcccagctcgaagccgcgaaggccgaacttgccaaggatcaggccgcgttgagt
caggctgagctgaacgtttcctacaccagaattaccgctccacaggacggcatggtaggc
ctgcgctcggttcgcgtcggcgcctatgtttcacaagggcagcccctgatggctgttgtg
ccgctacacgaagcctttgtagtggccaattttcgagaaactcagctggcacgtatggtc
atgaatcaggcagtcgaattgcacgtcgacagtattccggatcacagctttcgagggcat
atcgaaagtgtcgcgccggcgaccggcgtgtccttttcggagatcgcaccggataacgcg
actggcaacttcacgaaagtcgttcagcgaattccagtgaaaattatgtttgagccgaat
caggctgatcttgatcggctgcgtatcggtatgtcggtcgtcgccagtgtcgataccact
aaggggcactga
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