Pseudomonas cannabina pv. alisalensis: JGS08_22900
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Entry
JGS08_22900 CDS
T07379
Name
(GenBank) polyprenyl synthetase family protein
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00900
Terpenoid backbone biosynthesis
pcab01100
Metabolic pathways
pcab01110
Biosynthesis of secondary metabolites
Module
pcab_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
JGS08_22900
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pcab01006
]
JGS08_22900
Enzymes [BR:
pcab01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
JGS08_22900
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
JGS08_22900
2.5.1.29 geranylgeranyl diphosphate synthase
JGS08_22900
Prenyltransferases [BR:
pcab01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
JGS08_22900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
QQN21387
LinkDB
All DBs
Position
5117244..5118131
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AA seq
295 aa
AA seq
DB search
MIASYQAQSQTRVNAALEGLFQAPSPELTRLYEAMRYSVMNGGKRVRPLLAYAACEALGG
VAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA
FTALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHK
TGALIEASVRLGALASGHADQPRLAALQVYARAIGLAFQVQDDILDVESDTATLGKRQGA
DIARDKPTYPALIGLQAAKGYALELRDQALGALADFGPQAEPLRELARYIVERRH
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgattgcgagctatcaggcgcaaagccagacgcgtgtgaatgccgcgctcgagggcctg
tttcaggctccgagccctgaactgacacgcctctacgaggccatgcgctacagcgtgatg
aacggcggcaagcgcgtgcgtccattgctcgcctacgcagcctgcgaggcgctgggcggt
gtcgccgaagatgccaacggcgcggcctgcgcggttgagctgatccatgcctattcgctg
gtgcacgatgacttgccggcgatggacgatgacgatctgcgccgtggccagcccaccacg
cacaaggcattcgatgaggcctgtgcgatccttgccggtgacggcctgcagagtctggcg
ttcaccgcgctgctcgcaccgcacctcagctcacgcgatgccgaaacccgtttgcagatg
gtcagcacactggccgctgccgcagggccggccggaatggtcggcggacaggcgatcgac
ctgggttcggtcgggctgaagctggatcaggctgcgctggaatatatgcatcggcacaag
accggcgcgttgatcgaagccagcgtcaggctcggcgcactcgccagcggccatgccgat
cagccacgactcgctgccttgcaggtatatgcacgcgcgatcggcctggcttttcaggtg
caggacgacatcctcgatgtcgaaagcgataccgcaaccctcggcaagcgccagggtgcc
gatatcgcgcgcgacaagccgacctaccccgccctgatcgggctgcaggcagccaagggt
tatgccctggaattgcgcgatcaggcgctgggcgcactggctgatttcggccctcaggcc
gagccgttgcgcgagctggcacgctacatcgtggaacgtcgccactga
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