KEGG   Pseudomonas cannabina pv. alisalensis: JGS08_22945
Entry
JGS08_22945       CDS       T07379                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pcab  Pseudomonas cannabina pv. alisalensis
Pathway
pcab00740  Riboflavin metabolism
pcab01100  Metabolic pathways
pcab01110  Biosynthesis of secondary metabolites
pcab01240  Biosynthesis of cofactors
pcab02024  Quorum sensing
Module
pcab_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:pcab00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    JGS08_22945 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    JGS08_22945 (ribD)
Enzymes [BR:pcab01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     JGS08_22945 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     JGS08_22945 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam STAS
Other DBs
NCBI-ProteinID: QQN21396
LinkDB
Position
complement(5125399..5126544)
AA seq 381 aa
MSALLTEQAALDVHYMARALELARKGLYSTHPNPRVGCVIVRDGQIVGEGWHARAGEPHA
EVHALRQAGELARGATAYVTLEPCSHQGRTPPCADALVDAGLARVVAAMQDPNPEVSGRG
LLRLMNAGIGVQCGVLESEARALNKGFLKRMETGRPYVRVKLAMSLDGRTAMASGESQWI
TGPEARSAVQRLRAQSSVVLTGADTVLADNARLTVRPDELGLNAEMSALAATSPPLRVLI
DGRLRVPLDAPFFQAGSALVVTCAAASARGRYQEEGHEMLALADSAGHVDLRKLMGELAN
RGVNEVLVEAGPRLAGAFARLGLVDEFQIFIAGKFLGSSARPLLDLPLAQMSEALELQIV
EMRAVGNDWRVIALPVSAPGV
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgagtgcattgttgactgagcaggctgcccttgacgttcattacatggcgcgtgcgctg
gaactggcgcgcaaaggtctgtattccacgcaccccaacccgcgagtcggctgcgtcatc
gtgcgtgatggccagatcgtcggcgagggctggcatgcgcgagcaggcgagccccatgct
gaagtgcatgccttgcgtcaggcaggagagctggccagaggcgcgaccgcctacgtcaca
cttgagccgtgcagccatcaggggcgtacgccgccctgtgccgatgcgctggtggatgcc
gggctggcgcgcgtggttgccgcgatgcaggaccccaatccggaggtttccggtcgcggc
ctgctgcgcctgatgaatgccggcatcggcgttcagtgcggcgtgctggaaagcgaagcg
cgggcgctgaacaaaggctttctcaagcgcatggagaccggtcggccctatgtccgggtc
aaactggccatgagtctggatggtcgaacggccatggccagcggtgaaagccagtggatc
accggtcccgaagcccgctctgcggtgcaacgtctgcgcgcgcagtcaagcgtggtactg
acgggcgcggataccgtgctggcagacaacgcccgcctgaccgtgcgtcctgatgaactg
gggctcaatgccgaaatgagcgccctggccgccacgtctccacccttgcgcgtcctgatt
gacggccgcctgcgtgtgccgctggatgcgccgttctttcaggccggcagcgcgctggtg
gtgacctgtgcggcagcgtcggcacggggccgttatcaggaagaaggccatgaaatgctg
gcgctggccgacagcgcgggtcatgtggacttgcgcaagctgatgggcgaactggcaaac
cgtggcgtcaacgaggtgctggtcgaggccggtccgcgtctggcgggtgcgtttgcgcgt
ctcgggctggtcgacgaatttcagattttcatcgccggcaagtttctcggctcatcggcc
cggccgctgcttgatctgccgcttgcgcagatgagtgaagcgctggaactgcagatcgtc
gaaatgcgagccgtcggcaatgactggcgagtcattgctctccctgtctctgcacccggc
gtataa

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