Pseudomonas cannabina pv. alisalensis: JGS08_23130
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Entry
JGS08_23130 CDS
T07379
Name
(GenBank) MATE family efflux transporter
KO
K26937
MATE family, multidrug efflux pump
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_23130
Transporters [BR:
pcab02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
JGS08_23130
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
QQN21430
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All DBs
Position
complement(5163061..5164401)
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AA seq
446 aa
AA seq
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MSTLLTDWRHRSTHRRVWALAAPMILSNISVPLVALVDSAVIGHLPHAHQLGAVAVGATL
YTFLAWAMGFLRMGTTGFAAQAAGRSDSAALRRILLQGLLLAGGLALLLGVIALPFSHLA
LAMMQPSADLQQMTLDFFHTRLFGLPAALASYALVGWFLGTQNARAPLAILLVTNVVNIV
LNLWFVMGLDWGVIGSARASVLAEWTGVVLGLLLARKTLRAWPGQIVWSALKLWSNWRPL
LAVNRDIFLRTLALQSVMFLITVQGARLGDATVAANALLLNGLLLTAHALDGLAHAVEAL
CGHAIGARDRDTLRRSLVVAGGWSLIASVGFALLFLAGGHWFVSLQTDIPEVRETAITYL
PYLALMPLLAVWSYLLDGLFIGATRAREMRNAMLISAAGIAPVAWLASSHGNHALWLTFL
AFTLLRGLSLGAIAWRLTRSDGWFTH
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgttgctcactgattggcgtcaccgctcaacccatcggcgtgtctgggcgctg
gcggcgccgatgattttgtcgaacatttctgtcccgctggtggcgctggtcgacagtgcg
gtgattggccatttgccgcatgcgcatcagttgggtgccgtggcagtcggggcgacgctg
tatacctttctcgcttgggcgatggggtttctgcgcatgggcaccaccgggtttgccgcg
caggcggcggggcgcagtgacagcgcggcgttgcggcggattctgttgcaggggctgttg
ctggccggtggactggcgttattgctgggcgtgatcgccttgccgttcagtcatctggcg
ctggcgatgatgcagccgtctgccgacttgcaacagatgaccctggactttttccacact
cgattattcggcctgcctgcggcgctggccagttatgcgctggtcggctggtttctcggc
acgcagaacgcccgggcaccgctggcgatcctgctggtcaccaatgtggtcaacatcgtg
ctgaatctgtggttcgtgatggggctggactggggcgtgattggctcggcccgcgcgtcg
gtgctggcggaatggaccggcgtggtgctcggtctgctgctggcgcgcaagactttgcgc
gcctggcccggccagattgtctggtcggcgctgaagctatggagcaactggcggccgttg
ctggcggtcaatcgcgatatctttctgcgcacgctagcgctgcaatcggtcatgtttctg
attaccgtgcagggcgctcggctcggtgatgcaacggtcgcggccaacgcattgctgctt
aacggcctgctgttgacggcccatgcactggacgggctggcgcatgcggtcgaagcgctt
tgcggccatgccatcggggcgcgtgaccgcgacacgctgcgtcgttcactggtggtggca
ggcggctggtcgctgattgccagcgtggggtttgcgctgttgtttctggcaggtgggcat
tggttcgtcagcttgcagaccgacattcccgaggttcgtgaaacggcgatcacctacctg
ccgtatctggcgctgatgccgttgctcgcggtctggagctatctgctcgacgggctgttc
atcggcgccacgcgggcccgcgaaatgcgcaacgcgatgctgatcagcgcggcaggcatc
gcgccggttgcgtggctggcttccagccatggcaatcacgcgctatggctgacctttctg
gcgtttaccctgctgcgcggcttgagcctgggcgccattgcctggcgcctgacacgtagc
gatggctggttcactcactga
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