Pseudomonas cannabina pv. alisalensis: JGS08_23165
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Entry
JGS08_23165 CDS
T07379
Name
(GenBank) type II and III secretion system protein family protein
KO
K02280
pilus assembly protein CpaC
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JGS08_23165
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcab02044
]
JGS08_23165
02035 Bacterial motility proteins [BR:
pcab02035
]
JGS08_23165
Secretion system [BR:
pcab02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
JGS08_23165
Bacterial motility proteins [BR:
pcab02035
]
Pilus system
Pilus assembly proteins
JGS08_23165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
Motif
Other DBs
NCBI-ProteinID:
QQN21437
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Position
5174795..5176045
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AA seq
416 aa
AA seq
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MSCCFVPVKKSRWLVILLTALSMDSVWAAPGSCSTLAAMPAAVEIDQGIQQNISSPVAIT
RIAVGDPKIADVHVSGNDGFLLTGVAQGTTSLMVWTACSSAPRQSMVFVRGRATASMVET
ASAPSGDAQLPSQVQTDIRFVEVSRSKLKEASTSIFGKGSNNFLFGAPGTVPGVNVTPGT
VSATKPNIPLNNSNFNIVWGGGSSKVLGMLNAMENSGYAYTLARPSLVALNGQSASFLAG
GEFPVPVPNGEGNGISIEYKEFGVRLTLTPTVVGRDRILLKVAPEVSELDFSAGITIAGT
TVPALNIRRTDTSIALADGESFVVSGLISSSNSGSVDKFPGLGDIPILGAFFRSSQIQRD
ERELLMIVTPHLVQPLAANAQLPSLPGEGLRNYDPSFPRLYFLESGDFDRRSGLSQ
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagctgctgtttcgtgccagttaaaaaaagcaggtggctggtcatcctgttgaccgcc
ctgtccatggactcagtctgggccgcgccgggcagttgcagcacgctcgctgcgatgcca
gcggcggtggaaatcgatcaggggattcagcagaacatcagttcaccagtggcgatcacg
cgtatcgccgtaggcgacccgaaaattgccgacgtacacgtgagcggcaacgatggcttt
ctgctgaccggcgtcgcccagggcaccaccagcctgatggtctggaccgcctgttccagc
gcgccgcgccagagcatggtgttcgtccgtgggcgggcgactgcgtcgatggtcgagacg
gcatccgcgccgtccggcgacgcacagttgcccagtcaggtgcagaccgatatccgcttc
gtcgaggtcagccgcagcaaactcaaggaagccagcacgtcgatcttcggtaaaggctcg
aacaactttctgttcggcgcgcctggcacggtgcccggcgtcaacgtcacacccggcacc
gtgagcgctaccaagccgaacattccgttgaacaacagcaatttcaatatcgtctggggc
ggcggcagtagcaaggtgctgggcatgcttaacgccatggaaaacagcggctacgcctac
acactggcgcgtcccagcctggtcgcgctcaacggccagagcgcgagctttctggctggc
ggcgagttcccggtgcccgtacccaatggtgaaggcaacggcatttccatcgagtacaag
gaattcggcgtgcgtctgaccctgacgccgacagtggtaggacgcgaccggattctactc
aaggtcgcgccggaggtcagtgagctggacttctctgccggtatcaccatcgctggaacc
accgtgcccgcgctcaatatccgccgcaccgacaccagcatcgcgctggccgacggggaa
agcttcgtggtcagcgggctgatcagttccagcaacagtggctcggtggacaagtttccc
gggctgggcgacatcccgattcttggcgctttttttcgcagctcgcagatccagcgtgac
gagcgtgaactgctgatgatcgtcaccccgcatctggtgcaacccctggccgccaacgcc
cagctgccctcgctgccgggcgaaggtctgcgcaattacgacccgagctttccgcgcctg
tatttcctggaaagcggcgatttcgaccggcgcagcgggttatcccaatga
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