Pseudomonas cannabina pv. alisalensis: JGS08_23685
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Entry
JGS08_23685 CDS
T07379
Symbol
psd
Name
(GenBank) phosphatidylserine decarboxylase
KO
K01613
phosphatidylserine decarboxylase [EC:
4.1.1.65
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00564
Glycerophospholipid metabolism
pcab01100
Metabolic pathways
pcab01110
Biosynthesis of secondary metabolites
Module
pcab_M00093
Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
JGS08_23685 (psd)
Enzymes [BR:
pcab01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.65 phosphatidylserine decarboxylase
JGS08_23685 (psd)
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Gene cluster
GFIT
Motif
Pfam:
PS_Dcarbxylase
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
QQN21536
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Position
5291471..5293318
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AA seq
615 aa
AA seq
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MSEFTGLSLVIEPNDLLQRLDAPELILVDLTSSARYEAGHIRGARFVDPKRTQLGKPPAP
GLLPEHAGLEQLFGELGHNPDAVYVVYDDEGGGWAGRFIWLLDVIGHTRYHYLDGGLLAW
EAESLPLSTDVPPVAGGPVALTLHEEPTATREYLQSRLGAADLAIWDARGPTEYSGEKVV
AAKGGHIPGAVNFEWTEGMDKARNLRIRQDMPQILRDLGITPDKEVITHCQTHHRSGFTY
LVAKALGYPRVKAYAGSWGEWGNLPDTPVENPAAPALAVEPVEPTRPVPPVPPVEVEAVE
PVRTTEPGRTSQKSSGHSFSGHSSSRPSMKDRLFILSQYLLPHHLLSRLAGCVAECRVRW
FKNAFTEWFAHRYQVDMSQALVEDLTSYEHFNAFFTRALKPDARPLDTTPGAILSPADGA
ISQLGPIDHGRIFQAKGHSFSVLELLGGDPKLSAPFMGGEFATVYLSPKDYHRVHMPLAG
TLREMVYVPGRIFSVNQTTAENVPELFARNERVVCLFDTERGPMAVVLVGAMIVASVETV
WAGLVTPPKRELKTFRYDEAARAPIHLEKGAEMGRFKLGSTAIVLFGPDQVKWVEQLKAG
SSVQMGQALAVPKQA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaattcactggcttgtcgctggtcatcgaacccaacgatctgcttcagcgcctt
gatgctcctgaactgatcctcgtggatctgaccagcagcgctcgctacgaagccgggcac
attcgcggcgcccgctttgtcgacccgaaacgcacgcaactgggcaagccaccggcgccc
ggcctgctgccggagcatgccggcctagagcaactgttcggcgagctgggccacaatccc
gatgcggtctacgttgtttacgacgatgaaggcggcggctgggccgggcgtttcatctgg
ctgctggatgtcattggccacacccgctatcactatctggacggaggcctgctggcctgg
gaagcagaatcgctgccgctgagcaccgacgttccgccggttgcaggcggcccggtcgcg
ttgacgctgcacgaagaaccgaccgccacccgcgaatacctgcaaagccgtctgggcgca
gccgacctggcaatctgggacgcgcgcggcccgaccgagtactcgggcgaaaaagtggtg
gcggccaaaggcgggcatattcccggcgccgtcaacttcgaatggaccgaggggatggac
aaggcgcgcaacctgcgcattcgtcaggacatgccgcagattctgcgtgacctgggcatc
acccccgacaaggaagtgatcacccattgccagacccaccaccgctcgggctttacctat
ctggtggcgaaagcgttgggctatccacgggtcaaggcgtacgccggttcgtggggcgaa
tggggtaaccttccggacaccccggtggaaaacccggcagcgcctgcactggccgtcgag
cctgtagagcccacccggccagtcccgccagtcccgccagtcgaagtcgaagccgtcgaa
ccggttcgcaccaccgaaccgggccgcacgtctcagaaatcttcaggacactcattttca
ggacactcctcttcaaggccctcgatgaaagaccgtctgtttattctcagccagtacctg
ttgccgcaccatttgctgtcccgactggctggctgcgtcgccgaatgccgcgtgcgctgg
ttcaagaatgcctttactgaatggttcgcccaccgctatcaggtggacatgtcgcaggcg
ctggtcgaagacctgacgtcttacgagcacttcaacgcgtttttcacccgcgccctgaaa
cccgatgcacgcccgctggacaccacgcccggcgcgatcctgtcgcctgccgacggtgcc
atcagccagctgggcccgattgatcatggccgcatcttccaggccaaaggtcacagtttc
agcgtgctcgagctgctgggcggcgatccgaagctttctgcgccattcatgggcggcgag
ttcgccaccgtttacctgtcgccgaaggactaccaccgcgtacacatgccgctggccggt
acactgcgtgaaatggtctacgtgccgggtcgcatcttttcggtcaaccagaccaccgct
gaaaacgtgccggagctgttcgcgcgtaacgaacgagtggtttgtctgttcgacaccgag
cgcgggccaatggccgtggtgctggtcggcgcgatgatcgtggcatcggtcgagacggtc
tgggccgggctggtcacgccccccaagcgggaattgaagactttccgttacgacgaagcg
gcacgtgcgccgatccatctggagaaaggcgcagaaatgggccgcttcaagctgggctcc
acggccatcgtactgttcgggccagaccaggttaaatgggtcgagcagctgaaagccggc
tccagcgtacagatggggcaggcactggcggttccgaaacaagcctga
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