Pseudomonas cannabina pv. alisalensis: JGS08_23815
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Entry
JGS08_23815 CDS
T07379
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JGS08_23815 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_23815 (msbA)
Enzymes [BR:
pcab01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
JGS08_23815 (msbA)
Transporters [BR:
pcab02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JGS08_23815 (msbA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_22
AAA_16
AAA_29
nSTAND3
RsgA_GTPase
AAA_30
NB-ARC
ABC_ATPase
Herpes_UL43
nSTAND1
MMR_HSR1
APS_kinase
AAA_24
NACHT
Motif
Other DBs
NCBI-ProteinID:
QQN21559
LinkDB
All DBs
Position
complement(5324673..5326469)
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AA seq
598 aa
AA seq
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MANSNQQSSMKIYLRLLKYVLPYWGAFAVSIVGFVLFASSQPMLADMLKHFLDALQKPDD
TKFLGFSLVFGVPLLVVLIAVYQGIGSFLGNYYLAKVARGVVHDLRCALFDNLLTLPNRY
FDNHNSGHLISRITYNVTMVTGAATDAIKVVIREGLTVVFLFGYLLYSNWKMTLVLLAIL
PFIAVLVSSASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGETYETERFHKASA
DNMNRSLGMTRTQSIYTPVLQLVIYIGMAVLMYLVLYLRGDASAGELIAYITAAGLLPKP
IRQLSEVSATIQKGLAGAESIFEQLDEAPEIDTGTQTRERVSGRLEVRNLSFQYPGTEKL
VLDDISFTAESGQMVALVGRSGSGKSTLANLIPRFYHHDKGQILLDGIDVEDYKLVNLRR
HIALVTQQVTLFNDTVTNNIAYGDLAGAPIEDVRKASEDAYAAEFVEQMPQGYDTLVGEN
GVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDQVMKGRTTLVIAH
RLSTIEKADLILLMDKGRIVERGTHDELLALNGLYARLHEKDFIEVTGQVATAAESDV
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggccaattccaaccagcaatcgagcatgaagatctatctgaggttgctgaaatacgta
cttccgtactggggcgctttcgcggtcagtatcgtgggtttcgtgttgttcgcctccagc
cagccgatgctggccgatatgctcaagcactttctggatgccctgcaaaagcccgatgac
accaagtttctcggcttttcactggtgttcggcgtgccgctgctggttgtgctgattgcc
gtttatcaaggcatcggctcgttccttggcaactactacctggccaaggtcgcacgcggt
gtggttcatgacttgcgctgcgcgttgttcgataacctgctgacgctgcctaaccgctat
ttcgacaaccacaactccggtcatctgatctcgcgcatcacctacaacgtaaccatggtc
accggtgctgccaccgacgcgatcaaagtggtcatccgtgaggggcttacggttgttttc
ctgttcggctatctgctgtacagcaactggaaaatgactctggtattactggcgattctg
ccgttcattgcagtgctggtcagcagcgcaagcaagaaatttcgcaagcagagcaagaag
attcaggtggcgatgggcgacgtgactcacgttgcctcggaaaccattcagggctaccgc
gtggtgcgcagctttggcggcgagacctatgaaaccgagcgttttcacaaggccagcgcc
gataacatgaaccgcagtctgggcatgacgcgtacccagtccatctacacgccggtcctg
caactggtgatctacatcggcatggcggtgctgatgtatctggttctgtaccttcgtggt
gatgcatcggcgggcgaactgattgcctacatcaccgctgcgggtctgctgcccaagcct
atccgtcaattgtccgaagtcagcgccaccatccagaaaggtctggcgggtgcggaaagc
atcttcgaacagcttgatgaagcaccggaaatcgacacgggtacgcagacccgcgagcgc
gtcagcgggcgccttgaagtgcgtaatctgagcttccagtatcccggcaccgagaagctg
gtgcttgacgacatttcctttaccgccgagtcgggccagatggtggcgctggtcggccgc
tcaggcagcggcaagtcgaccctggcgaacctgatcccgcgcttctatcaccacgacaag
ggtcagatactgctcgacggcatcgacgtcgaagactacaagctggtcaatctgcgccgc
cacattgcgctggtgacccagcaggtcacgctgttcaacgacacagtgaccaataacatc
gcctatggcgatttggccggtgcgccgatcgaagatgtgcgcaaggcgtccgaagatgct
tacgccgccgagttcgtcgagcagatgccgcagggctacgacacgctggtcggcgaaaac
ggcgtgctgctttccggcggtcagcgtcagcgtctggcgattgcccgtgcgctgctcaag
aacgcaccgctgctgattctcgacgaagccacgtcggcactggataccgagtccgagcgc
catatccaggcggctcttgatcaagtcatgaaaggccgcaccacgctggtgatcgcgcat
cgcctttcgaccatcgagaaagccgacctgattctgttgatggacaaggggcgcattgtc
gagcgcggcactcacgacgaattgctggccctcaatggcctgtatgcacgtttgcacgag
aaagacttcatcgaggtaacagggcaggtcgcgacagcggcggagtccgacgtttga
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