Pseudomonas cannabina pv. alisalensis: JGS08_23820
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Entry
JGS08_23820 CDS
T07379
Name
(GenBank) capsular biosynthesis protein
KO
K07265
capsular polysaccharide export protein
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
JGS08_23820
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GFIT
Motif
Pfam:
Capsule_synth
DUF6716
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
QQN21560
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Position
complement(5326683..5327792)
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AA seq
369 aa
AA seq
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MTMLFLSMARHQGLYFNRLLNETELSGRVVTSLNMSWPRASRMAATLSRIDFDALVDEKC
EERRIKNKSAGYLYRRLLRLELTWAALRIQALLDRERPDAVGVWNGAHRYCRLLIALSPP
ECKTFFFENGLLPNTTTVDPKGVNYLNSMPRDPAFYLDYPYPVAERAPAAVLVPRKPRSR
GPAPIKLPERFIFIPFQDDRDTQVRLFSPWVGNMREMFAVGERLAAESGMTVVFKEHPSS
RESYPDLHKRASKNVLFANGNATQQLIEASQFVVTLNSTVGLESLLLGKPVMTLGKAFYN
IDGLVRHAENVDQAVAHARAFPDWSLDERLRRNFLHYLAEHYCIKGDWKTADRSQLRRVA
NRLLGKSGC
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgctgttcctgtcgatggcccgacatcagggtctctatttcaaccgtttgctc
aacgagaccgaactgagtgggcgcgtggtcacgtcgctcaatatgtcgtggccgcgtgca
tcgcgtatggccgcaacgctgtcccgcatcgacttcgacgcgctggtcgacgagaagtgt
gaagagcgacggatcaagaacaagagcgccggctacctgtatcgccggttactgcgcctt
gaactgacctgggctgccttgcgtattcaggctttgctcgatcgcgagcgtccggatgcg
gtcggcgtatggaacggtgctcatcgctactgccgtttgctcatcgcgctgtcccctccg
gaatgcaagaccttcttcttcgagaacggtctgttgcccaacacgacgaccgtagacccg
aaaggtgtgaattacctcaattccatgccccgcgaccccgctttctacctcgattacccg
tatcccgtcgccgagcgcgcgcccgctgcggtgctggttccgcgcaagccgcgcagtcgc
ggtccggcaccgatcaagctgcccgaacggttcatcttcattccgtttcaggatgatcga
gacacgcaggtgcgcctgttctcgccgtgggtcggcaacatgcgcgagatgttcgccgtc
ggcgagcgtctggcggcggaaagcggcatgacggtcgtgttcaaagagcatccgtcgagt
cgcgagagctaccctgatctccacaagcgcgcgtcgaagaacgtgctgtttgccaacggt
aacgccacgcaacaattgatcgaagccagccagttcgtcgtcacgctgaattcgacggtg
ggcctggaaagcttgctgctgggcaagccggtaatgacactgggcaaagccttttacaat
atcgacgggctggtgcggcacgccgaaaatgttgatcaggccgtcgcgcatgctcgcgcg
ttcccggactggtcgctcgatgagcggttgcggcgcaattttctgcactacctggccgag
cactactgcatcaagggcgactggaagacggccgacaggtcacaactgcgccgcgtcgcc
aaccgcttgctgggcaagtccggatgctga
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