Pseudomonas cannabina pv. alisalensis: JGS08_23980
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Entry
JGS08_23980 CDS
T07379
Name
(GenBank) ATP-grasp domain-containing protein
KO
K11263
acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:
6.4.1.2
6.4.1.3
6.4.1.-
6.3.4.14
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00061
Fatty acid biosynthesis
pcab00074
Mycolic acid biosynthesis
pcab00280
Valine, leucine and isoleucine degradation
pcab00620
Pyruvate metabolism
pcab00630
Glyoxylate and dicarboxylate metabolism
pcab00640
Propanoate metabolism
pcab01100
Metabolic pathways
pcab01110
Biosynthesis of secondary metabolites
pcab01120
Microbial metabolism in diverse environments
pcab01200
Carbon metabolism
pcab01212
Fatty acid metabolism
Module
pcab_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
JGS08_23980
00630 Glyoxylate and dicarboxylate metabolism
JGS08_23980
00640 Propanoate metabolism
JGS08_23980
09103 Lipid metabolism
00061 Fatty acid biosynthesis
JGS08_23980
00074 Mycolic acid biosynthesis
JGS08_23980
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JGS08_23980
Enzymes [BR:
pcab01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
JGS08_23980
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
JGS08_23980
6.4.1.3 propionyl-CoA carboxylase
JGS08_23980
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GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
BSH_YhbJ
Dala_Dala_lig_C
LAL_C2
BSH_RND
RnfC_N
BSH_Fcp1
Peptidase_M23
ATP-grasp_3
BSH_CzcB
BSH_CusB
Motif
Other DBs
NCBI-ProteinID:
QQN21590
LinkDB
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Position
complement(5384302..5386035)
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AA seq
577 aa
AA seq
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MKKVLIANRGEIAVRIARACRDYGVASVAVYADADIDALHVRQADEAYGLQGERPTDTYL
NIEKLLAVAARAGADAVHPGYGFLSERAEFARAVVDAGLTWIGPDPATIDALGDKVQARR
IALKVGAPLVAGTENPVSDASEVVAFAEQHGLPIAIKAAFGGGGRGLKVAWKLDEVAELY
ESAVREAVSAFGRGECFVERFLDRPRHIEAQIIADRHGRVVVVGTRDCSLQRRNQKLIEE
APAPYLNDELRQRIHESARAVCAEAGYVGAGTVEFLLSGDGTLSFLEVNTRLQVEHPVTE
ETSGIDLVIEQLRVADGLPLSFDGTPVPRGHSFEFRINAEDAGNGFLPTPGSIDVFQPPS
GPGVRLDTGVTEGSRVSPNFDSMIAKLIVTGATREQAISRARRALAEFKVEGVATVLPFH
RAVMDHADFTAPDTFAVHTRWIETDFAEQVTIAPRTSAPVDPGVLRTFVEIDGKRHELGL
PAALLNGMSLNSAASADTHLPAADAPDLHAVLTPVAGNLHAWAVEDGATVEKGQVIAIME
AMKMETSILAPCAGQLKIGKEPGGYFDAKSVIGRIEA
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggttctgattgccaaccgtggcgaaattgccgttcgtattgcccgtgcctgc
cgtgactacggggtcgcgtcggtggcggtgtatgcagatgccgacattgatgcgctgcac
gtgcgccaggccgatgaagcgtatggcttgcagggcgagcgcccgaccgacacctacctg
aacatcgagaaactgctggcggtggctgcgcgtgcaggtgccgacgcggttcaccccggc
tacggcttcctctcggaacgcgccgaatttgcccgtgcggtggttgacgccggtctgacc
tggatcggtcctgatcctgcgaccatcgacgcgctgggtgacaaggttcaggcccggcgt
atcgccctcaaagttggcgcgccgctggtggcgggcactgaaaacccggtgagcgatgcg
tctgaagtggtcgccttcgccgagcagcacggcctgccaattgccatcaaagcagcgttc
ggcggcggcggtcgcggcttgaaagttgcttggaaactcgatgaagtcgccgagctttac
gagtccgcagtgcgcgaggcggtgtcggcgtttggccgtggcgaatgcttcgtcgagcgc
tttctggaccggccacgccatatcgaagcgcagatcatcgctgaccgtcacggccgggtc
gtggttgtcggcactcgcgattgctcgctgcaacgccgcaaccagaagctgatcgaagaa
gcgccagcgccttacctgaacgatgagttgcgccagcgcatccacgaatcggcccgtgcg
gtgtgcgccgaagccggttatgtcggtgccgggacggtggaatttttgctcagcggcgat
ggcacgctgtcgtttctggaggtcaacacccgcttgcaggtggagcacccggtcaccgaa
gaaaccagcggtatcgatctggtcatcgagcaattgcgcgtcgcggatggcttgccgttg
tcgttcgacggcacgcctgtaccgcgcggccacagcttcgaattccgcatcaacgccgaa
gatgcaggcaacggctttttgccgacgccgggcagcatcgatgtatttcagccgccatcc
gggccgggcgtgcggctggacaccggtgtaaccgaaggctcgcgggtatcaccgaacttc
gattcgatgatcgccaagttgatcgttaccggtgcaacccgcgaacaggccatcagccgc
gcccgtcgcgccctggccgagttcaaggtggaaggcgtcgccaccgtgctaccgttccat
cgggcagtcatggatcacgctgacttcaccgctcccgataccttcgctgtgcacacccgc
tggatcgaaaccgacttcgccgaacaggtcactatcgcgccacgcaccagcgcgccggtt
gatcccggtgtgctgcgcaccttcgtcgaaatcgacggcaaacgccacgaattgggcctg
cccgctgcgctgttgaacggcatgagtctgaactcggcagcgtcggctgacacccacctg
ccagccgctgacgccccggacctacacgcagtgctgacgcccgttgctggcaatctgcat
gcatgggccgtcgaggacggtgcgacggtagagaaaggtcaggttatcgcgatcatggag
gccatgaagatggagacttcaattctggcgccgtgtgccgggcagttgaagattggcaag
gagccaggcggttacttcgacgccaaatcggtgatcgggcggatcgaagcctga
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