Pseudomonas cannabina pv. alisalensis: JGS08_24025
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Entry
JGS08_24025 CDS
T07379
Name
(GenBank) type IV pili methyl-accepting chemotaxis transducer N-terminal domain-containing protein
KO
K02660
twitching motility protein PilJ
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02020
Two-component system
pcab02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JGS08_24025
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
JGS08_24025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcab02044
]
JGS08_24025
02035 Bacterial motility proteins [BR:
pcab02035
]
JGS08_24025
Secretion system [BR:
pcab02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
JGS08_24025
Bacterial motility proteins [BR:
pcab02035
]
Pilus system
Twitching motility proteins
JGS08_24025
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MCPsignal
PilJ
Clusterin
HTH_MmpR5
BLOC1_2
Motif
Other DBs
NCBI-ProteinID:
QQN21599
LinkDB
All DBs
Position
complement(5399753..5401795)
Genome browser
AA seq
680 aa
AA seq
DB search
MGNTGRSLEGARSRTQIILLFVALIVFIMLLFANFAYLNTQSNYDKQYIGHAGELRVLSQ
RIAKNATEAAAGKTPAFKLLADARNDFDVRWGYLRKGDPATGLPAAPDLIRDELRTVQKD
WEGLRKSTDVILASEQTVLSLHQVAATLAETIPQLQAEYEKVVEILLQSRAPAAQVVVAQ
RQALLAERILGSVNTVLAGDETAVQAADAFGRDASQFGRVLNGMLEGNATLRISQVEDRD
ARARLAEIAELFEFVSGSVDEILETSPELYQVREASGNIFNTSQTLLDETSMLANSLENL
AKRRTMNTVGGYVLGLLALMSIILIGLVMVRETNRQLRETAQKSERNQNAIMRLLDEIES
LADGDLTVTASVTEDFTGAIADSINYSIDRLRELVVTINLTAEQVASAVTETQATAMQLS
AASEHQALQISAASTAVNDMAASIDQVSANASESSAVAERSVAIANKGNEVVHNTIHGMD
NIREQIQDTSKRIKRLGESSQEIGDIVSLIDDIADQTNILALNAAIQASMAGDAGRGFAV
VADEVQRLAERSSSATKQIETLVRAIQNDTNEAVISMEQTTSEVVRGARLAQDAGVALGE
IEGVSRVLAELIESITDAAHQQAESAGQISQTMTVIQQTTSQTTSGTAATAESIGNLAKM
ASEMRRSVSGFTLPPSKKIG
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatacaggcaggtcactggaaggcgcacgaagccggacgcagattattctgctg
ttcgtcgcgctgattgttttcatcatgttgctgttcgccaattttgcttacctcaatact
cagtcgaactacgacaagcaatacatcgggcatgccggcgaactgcgcgttctgtcccag
cgcatcgccaaaaacgccaccgaagcggctgcgggcaaaaccccggcgttcaaattgctg
gccgacgcccgcaacgatttcgacgtgcgctggggctacctgagaaaaggcgaccccgcc
accgggctgcccgccgcaccggatctgatccgcgacgagctgcgcaccgtgcagaaagac
tgggaagggctgcgcaagagcaccgacgtgattctggccagcgaacagacggtactgtcg
ctgcaccaggtggcggcaaccctggcggaaaccatcccgcagttgcaggccgaatacgag
aaagtcgtcgagattctcctgcaaagccgtgcgcccgccgcgcaagtggtggtcgcccag
cgtcaggcgctgctggccgaacggattctcggttcggtgaataccgtgctggccggtgat
gaaaccgccgttcaggctgccgatgcgtttggccgcgatgccagccagttcggccgtgtg
ctgaacggcatgctggaaggcaacgcgacgctgcgcatctcacaggtcgaagaccgcgac
gcccgcgcgcgactggcggaaatcgccgagctgttcgagttcgtgtccggttcggtggac
gagattctcgaaacgtcgcccgagctgtaccaggtgcgtgaagcgtccggcaacatcttc
aacacctcgcaaaccctgctcgatgaaacgtcgatgctcgccaacagcctggaaaacctc
gccaaacgccgcaccatgaacaccgttggcggctacgtgctgggtttgctggcgctgatg
tcgatcatcctgatcggcctggtgatggtccgcgagaccaatcgacagctgcgtgaaacc
gcacagaagagcgagcgcaaccagaacgcgatcatgcgcctgctcgatgagatcgaaagc
ctggcggacggcgacctgaccgtgacggcctcggtgaccgaggatttcaccggcgcgatt
gccgactccatcaattactccatcgaccggctgcgcgaactggtggtgaccatcaacctg
acggctgaacaggtcgcttctgcggtcaccgaaacccaggccacggccatgcagctgtcg
gcggcgtccgagcatcaggcgttgcagatcagcgccgcgtcgactgccgtcaacgacatg
gcggcttccatcgatcaggtgtcggccaacgcgtcggagtcctcggcggtggcagagcgt
tcggtggcgattgccaacaagggcaacgaagtggtgcacaacaccattcacggcatggac
aacatccgcgaacagattcaggacacctccaagcgcatcaagcggctgggcgagtcttct
caggaaattggcgatattgtcagtctgattgacgatattgccgaccaaactaatattctg
gcccttaacgcggcgattcaggcctccatggccggtgatgccgggcgaggctttgcggtg
gttgccgacgaagtgcagcggctggccgagcgctcgtcgtccgccaccaagcagatcgaa
accctggtgcgcgccattcagaacgacactaacgaagcggtcatctccatggagcagacc
accagtgaagtggtgcgcggcgcacggctggcgcaggatgctggcgtggcgctcggtgaa
atcgaaggggtttccagagtgctggccgaactgatcgaaagtatcaccgacgccgcccat
caacaggccgagtccgccgggcagatttcccagaccatgactgtgattcagcagaccacc
tcgcagacgacctcgggcaccgccgcgacggccgagagcattggcaacctggcgaaaatg
gccagcgaaatgcgccgctcggtgtcgggcttcactttgccgccctcgaagaagatcgga
tga
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