Pseudomonas cannabina pv. alisalensis: JGS08_24680
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Entry
JGS08_24680 CDS
T07379
Name
(GenBank) multidrug transporter MatE
KO
K26937
MATE family, multidrug efflux pump
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_24680
Transporters [BR:
pcab02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
JGS08_24680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
QQN21715
LinkDB
All DBs
Position
complement(5548298..5549650)
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AA seq
450 aa
AA seq
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MAVTKAVFTEGSVLRHVVFMTGTSATSLLSIFLIEVLTVVYIAMLRDDSLLAAFAVAKTL
MFFLIAMILGIAVAVSTAVSRSLGSGVPDQARRLASSGLLLGIIAAVCGAALELIVLDPA
IRMLGGEGDSFTAAREYLWLTLPASVLVAVELLCVQILRSAGFGKQAMCILLISTAAVAI
ADPLLIVVFDLGLVGAGIAYLISSLVSAFLGFYYVHRVARLTCRVSLTYLSGDIIDIGRT
AIPAVVGNLATPVGMAYVMAAMAPFGSQALAAIGAIDRVIQVAFCVVFALPGALIPILGQ
NLGAMNTARVSQAVKTTYGLLICYGAATSLLLILLAEPLARLFYVSGEGLAVFSAFCRWG
GFFWTLIGLQFIATSIFISVGRPVYVTLFGWLRASLGTVPFVWYGAQAFGSVGVMLGQLL
GNTIVAFCACWLAYRVMKKVLSSEVIGIRN
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcggttaccaaagcagtcttcaccgagggctcggtgttgcggcatgtcgtgttcatg
accggcaccagtgcgaccagcctgttatcgatctttctgatcgaagtgctgacggtggtc
tacatcgcgatgctgcgtgacgacagtttgctggccgccttcgcggtggccaaaaccctg
atgtttttcctcatcgcgatgattctcggcatcgccgtggctgtctccaccgccgtgtcg
agaagcctgggcagcggcgtaccggatcaagccagacgactcgccagcagcggcttactg
ctgggcatcatcgccgccgtatgtggcgctgcgcttgagctgatagtgcttgatccagcc
atccgtatgctgggcggcgagggcgatagtttcaccgcggcgcgtgagtatctgtggctg
acccttccggcctcggtgctggtagccgtcgaactgttatgcgtgcagatcctgcgcagc
gcaggtttcggtaaacaggcgatgtgcatactgctgatctcgactgccgccgtcgccatt
gcggatccgctgcttatcgtcgtgttcgatctgggcctggtcggtgccgggatcgcctac
ttgatatcgagcctggtgtcggcatttctgggtttttattacgtccatcgagtggcccgt
ctgacctgtcgagtcagcctgacgtacctgtcaggggacatcattgacatcggccgaaca
gccatacctgcggtcgtcggaaatttggcgacgccggtgggcatggcctatgtaatggcc
gcaatggcgccgttcggatcccaggcgctggcggctatcggagcgatcgatcgggtcatt
caagttgcgttttgcgtggtgttcgccctgcccggtgcgctgatcccgatactggggcaa
aacctcggcgccatgaacaccgcccgtgtttcgcaagccgtaaaaacgacctacgggttg
ttgatctgctacggggcagccacgtcgctgctgctgattctgttggctgagcctttggcc
agacttttctatgtttctggcgaaggactagcggttttctccgcgttctgccggtggggc
ggctttttctggaccttgatcgggctccagttcattgccacatccatcttcatcagcgtc
ggtcgaccggtttatgtcacgctgttcggctggctgcgtgccagcttgggcacggtgccg
ttcgtgtggtacggcgcgcaagccttcggcagtgtcggggtaatgctcggacaattgttg
ggcaataccatagtggcgttttgtgcctgctggctggcgtatcgggtcatgaaaaaagtg
ttgagcagtgaggttattggaataaggaactga
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