Pseudomonas cannabina pv. alisalensis: JGS08_24780
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Entry
JGS08_24780 CDS
T07379
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_24780
Transporters [BR:
pcab02000
]
Other transporters
Pores ion channels [TC:
1
]
JGS08_24780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QQN21734
LinkDB
All DBs
Position
complement(5572282..5574597)
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AA seq
771 aa
AA seq
DB search
MRIALSDQGIFQAGTQMHTTHGDVVEHTLLAQAIDQAHAARGRRYGWLLMGLTALPWVPA
MADTDAAQNTETVALESVTVTATRREESLQKVPVAVSVIQGEQLERDNRNGVASIVQQVP
SLNFRTGASNKDTSLFIRGVGTISTSPGVEPTVATVIDGVVYARPGQATLDLLDLERIEV
LRGPQGTLFGKNASAGVLNVTTKAPTEETHGYIDQSYYSGNESRTRFGIGGSLIPQTLKG
LITTLFGSYDGNVDNKRNGQEVNGYNRKGARGKLEFTPNDDITFTLAADYMQSHDDAPNG
VVTKALTPSFASALAPVRADSDNRNVLSDYRSHVEDVNKGLSGQLDWQLGDYTLTSITAW
RGWDNTQYQDGDRLGTITAAFPGTEDKGELEFNQYSQELRLASPKGQFVEYVGGLFYMHG
KSDETYQRTLITPTTQNRGIADYSTTTDSYSVFGETTFNFTPDFRAIAGARWTHDDLEYD
HRRVSTSATTVSGIQPATRSSGSVDEDGKSGRLGLQYDLSESVMTYITYSRGYKGPAYNV
FFNMQPRDTEALKPETSNTWEVGLKATTWDKRLTTNLAVFHSDYDNYQANFFDSVAGQVV
TRLINAGSVSTEGVELDYALQATHNLKLSGALSYTRARIDTFACPAGAAASCNVDGKTLP
YSPDWKSYVRADYTIPLDNGLDIELGTDYSWQSEVQYDISQNPDTKQGAYGIWNASVALA
DYNSGWRVALLGKNLADKSYSPMLATGGNYVYRSVPRDDERYFGVQLRKDF
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcattgcactgtcggatcagggcatatttcaggcaggcacgcagatgcacacaaca
catggggatgtcgtcgaacacacacttctggcgcaagccatcgatcaggctcatgcggcg
cgggggcgtcgttatggatggctgttgatggggctgacggctctaccgtgggtgccggcc
atggcggataccgatgcagcgcagaatacggaaaccgtcgcgctggaatcggtcaccgtg
accgccacacgccgtgaagagtcgctgcaaaaagtcccggtcgcggtctcggtgattcag
ggcgaacaactggagcgggacaaccgcaacggcgtggccagcatcgtgcagcaagtgcca
tcgctgaatttccgtactggcgcttccaacaaggacacctcgctgttcattcgcggtgtc
ggcaccatttccacttcgccgggcgtcgaaccgacggtggcgaccgtgatcgatggtgtg
gtgtatgcgcgcccgggccaggccacgctggacctgctcgacctggaacgcatcgaagtg
ctgcgcggcccgcaaggcacgctgttcggcaagaatgcgtcggccggtgtgctcaacgtc
accaccaaggcgccgaccgaagagacccacggttatatcgatcagtcgtattacagcggc
aacgaaagccgcacccgtttcggcatcggcggcagcctgattccgcaaaccctcaagggc
ttgatcaccacgctgttcggcagctacgacggcaacgtcgacaacaagcgcaacggtcag
gaagtcaacggttacaaccgcaagggcgcgcgcggcaaactggaattcacgcccaacgat
gacatcaccttcaccctcgctgcggactatatgcaatcccacgatgacgcgcccaatggc
gtggtaaccaaggcgctgaccccgtcgttcgccagtgcgctggcaccggtacgtgccgac
agtgacaaccgtaacgtactcagcgattaccgcagccatgtcgaggacgtcaacaaaggt
ttgtccggccagcttgactggcaactgggtgattacaccctgacgtccatcaccgcctgg
cgcggctgggacaacacccagtatcaggatggcgaccgtctcggcaccatcaccgccgcc
ttccccggcacagaagacaaaggtgaactggagttcaaccagtattcccaagagctgcgc
ctggcttcgccgaaaggccagtttgtcgagtacgtcggtgggctgttctacatgcacggc
aagagtgacgaaacctatcagcgcacgcttatcacgccaaccacgcaaaaccgtggcatt
gccgattacagcaccaccaccgacagctactcggtgtttggcgaaaccaccttcaatttc
acgccggacttccgcgcgattgccggtgcgcgctggactcacgacgatctggagtacgac
catcgccgcgtttcgacatcggcgaccacggtcagcggcattcagcctgcaacccgcagt
tccgggtcggtggacgaggacggcaagtccgggcgtctcggcctgcaatacgacctgagc
gagagcgtgatgacctacatcacctactcgcgtggctacaaaggcccggcctataacgtg
ttcttcaacatgcagccgcgtgacaccgaagcgctcaagccggaaacgtcgaacacctgg
gaagtcggcctcaaggccaccacgtgggacaaacgcctgaccaccaacctggcggtgttc
cacagcgattacgacaactaccaggcgaacttcttcgacagcgttgccgggcaggtcgtg
acgcggttgatcaacgcaggcagcgtcagcaccgaaggcgtcgagctggattacgccttg
caggccacccataacctgaagctttccggcgcgttgtcctacacccgtgcgcgcatcgac
acgtttgcctgcccggcaggtgcggcggcgtcatgcaatgtcgacggtaaaaccctgccg
tacagcccggactggaaaagttacgtgcgcgccgattacaccatcccgctggacaacggc
ctggatatcgaactgggaaccgattacagctggcaaagcgaagtgcagtacgacatcagc
cagaatccggacaccaaacagggcgcttacggcatctggaacgccagcgtggcattggct
gactacaacagcggctggcgcgtggcgctgctcggcaagaatctggcggacaagtcttat
tcaccgatgctggcgactggcggcaactacgtttaccgatctgtgccgcgtgatgatgaa
cgctatttcggcgtgcagctgcgcaaggatttttga
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