Pseudomonas cannabina pv. alisalensis: JGS08_24785
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Entry
JGS08_24785 CDS
T07379
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcab03000
]
JGS08_24785
Transcription factors [BR:
pcab03000
]
Prokaryotic type
Helix-turn-helix
LacI family
JGS08_24785
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
TetR_N
HTH_3
HTH_Tnp_ISL3
DNA_pol_lambd_f
HTH_7
Motif
Other DBs
NCBI-ProteinID:
QQN21735
LinkDB
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Position
5574768..5575814
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AA seq
348 aa
AA seq
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MADEKPATRKRRGAGRVTITSVARQAGVSAITVSRYFNQPGQVSPELRERIAAAVSALGY
VPNLVAGGLASARSKVVAMVIPNISGPIFANTIQGFSDTLSQHGFQLLLASSYFSAEQEE
SAVRAFLGWSPAALVLTSRFHSTATEKMIEQTDIPVIETWDHQPERSPIQIGFSHYDVGV
TAARYLHAKGYRRIAFVQNSIAGDFSALERRDGYAVTLEGLGIKPWVFVPDAGRAPFEAG
KQAMETLMSQTPRPDAIFFANDNLAAGALLASQRAGLHIPQDCAVMGFGDYAFAEMMLPS
LTTIKPPALEIGVMAATRVLESLGVLPVEGEIQRLNLLDCRLVEREST
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgaaaaacctgcgacacgcaaacgccgaggcgcaggccgggtgacgatcacc
tccgtggcacgccaggcgggcgtgtcggccatcactgtgtcgcgctatttcaatcagccc
ggacaagtgtcgccagagttgcgcgaacgcatcgccgcggcagtcagcgcgctgggctat
gtacccaatctggtggcgggcggtctggcgtcggcgcgcagcaaggtggtggccatggtg
attcccaacatctccggccctatcttcgccaacaccattcagggcttcagcgacacgttg
agccagcatggtttccagttgctgttggcctccagctacttttccgccgaacaggaagaa
agcgccgtgagggcgtttctgggctggtcaccggcagcactggtattgaccagtcgcttt
cacagcaccgctacggaaaagatgatcgagcagaccgatatcccggtgatcgaaacctgg
gaccaccagcccgaacgcagcccgatccagattggtttctctcactacgacgtcggcgtt
accgcagcccgctatctgcacgccaaaggctatcgccgcatcgcgttcgtgcagaacagc
atcgcaggtgacttcagcgcactggaacgacgcgacggttacgccgtcaccctggaagga
ctcggcatcaagccatgggtgttcgtcccggacgccgggcgagcgccattcgaggcgggt
aaacaggcgatggaaacgctgatgagccagacgccacgccccgacgccatcttcttcgcc
aacgacaacctcgccgctggcgccctgctcgccagccagcgcgcaggcctgcacataccg
caggactgcgccgtcatgggctttggcgactacgccttcgcagaaatgatgttacccagc
ctcaccaccatcaaaccgcccgcactggagatcggcgtcatggcggcgacacgcgtactt
gaaagccttggggtgttaccggtggagggtgagatacagcggctgaatctgctggattgc
aggttggtggagcgggagagcacgtga
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