KEGG   Pseudomonas cannabina pv. alisalensis: JGS08_25085
Entry
JGS08_25085       CDS       T07379                                 
Name
(GenBank) type II toxin-antitoxin system HicB family antitoxin
  KO
K18843  antitoxin HicB
Organism
pcab  Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:pcab00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pcab02048]
    JGS08_25085
Prokaryotic defense system [BR:pcab02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HicA-HicB
    JGS08_25085
SSDB
Motif
Pfam: HTH_29 CENP-B_N HTH_7 HTH_11 HTH_23 HTH_28 HTH_38 HicB_lk_antitox HTH_26 HTH_31 KORA HTH_20 YdaS_toxin HTH_Crp_2 HTH_3 Crp Phage_NinH RepB HTH_17 HicB-like_2 MarR_2
Other DBs
NCBI-ProteinID: QQN21790
LinkDB
Position
complement(5642273..5642698)
AA seq 141 aa
MYQYPLDQHLEPTGVWLSCPDIPEMSASGDTLTEALSEALDGMESALSLYVEQRRKIPQA
SVVPGHELLMRLPALTVAKIMLWNSLLEEGVSRAELARRLGCTRQVVYRLVDFLHASKIE
QVERALAELGRRITLSIERAA
NT seq 426 nt   +upstreamnt  +downstreamnt
atgtatcaatatccattggatcagcatctggagccgacaggcgtttggctgtcgtgtcca
gacattcccgaaatgagcgcctctggcgacacccttactgaagcattgagcgaagctctt
gacggcatggaatcggctctatcgctctacgtcgagcagcgtcgcaagattccccaggcc
tcagtcgtacccggtcatgaactgttaatgcgtttgcctgcgctgactgttgccaaaatc
atgctgtggaatagcttgttggaagagggcgttagtcgtgctgagctagcgcgtcgcctg
ggttgcacgcggcaagtggtgtatcggcttgtggactttctgcatgcctcgaaaatcgag
caggtggagcgagcgctggctgagcttggtcggcgtattacgttgagtattgagcgggcc
gcttga

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