Pseudomonas cannabina pv. alisalensis: JGS08_25410
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Entry
JGS08_25410 CDS
T07379
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00300
Lysine biosynthesis
pcab00470
D-Amino acid metabolism
pcab01100
Metabolic pathways
pcab01110
Biosynthesis of secondary metabolites
pcab01120
Microbial metabolism in diverse environments
pcab01230
Biosynthesis of amino acids
Module
pcab_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JGS08_25410 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JGS08_25410 (lysA)
Enzymes [BR:
pcab01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JGS08_25410 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QQN21849
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Position
5699584..5700831
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AA seq
415 aa
AA seq
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MDAFNYRDGELFAEGVALSGIAERFGTPTYVYSRAHIEAQYRAYADALDGMAHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVH
CFNVESTDELERLQEVAAELNVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAED
VYIRASQLPNLEVIGVDCHIGSQLTTLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGL
GVRYRDEEPPLAADYIKAVRERLAGRDLGLLFEPGRFIVANAGVLLTRVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVRPRDSEARAYDIVGPICETGDFLAKDRELALAEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGSQAFEVRRRETVAELFAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgccttcaactaccgcgacggtgagctgttcgcggaaggggtagccttgtccggc
attgccgagcgcttcggtacgccgacctacgtctactcgcgcgctcacatcgaagcgcaa
taccgtgcctacgccgatgcgctggacggcatggcgcatctggtctgctttgcggtcaag
gccaactccaacttgggcgtactcaatgtcctggcgcgtctcggcgccggtttcgacatc
gtttcccgcggcgagctggagcgtgtgctggcggctggtggcaaagccgaaaaaatcgtg
ttctccggcgtcggcaagacccgcgaagacatgcgccgcgcgcttgaagtcggcgtgcat
tgcttcaacgtcgagtccaccgacgagctggagcgcttgcaggaagtggctgccgaactc
aacgttcgtgcaccgatctcgttgcgcgtcaatccggacgtggacgcgggcacccacccg
tacatctccacgggcctgaaagaaaacaagttcggcattgccatcgcggcggctgaagac
gtttacattcgcgcctcgcagttgccgaatctggaagtcatcggcgtcgattgccatatc
ggctcgcaactgaccaccctcgaaccctttatcgatgcgctggatcgtttgctggatctg
gtcgaccggctgggcgattgcggcatccatctgcaccacattgatctgggtggcggtctt
ggcgtgcgctatcgcgatgaagagcctccgctggcggctgactatatcaaggccgtgcgt
gagcggctcgctggccgggatctgggcctgctgttcgagccagggcgctttattgtggcc
aacgcgggcgtgctgctgacccgggtcgagtacctcaagcacaccgaacacaaggatttc
gccatcgtcgacgcggcgatgaacgacctgatccgccctgccctgtatcaggcctggatg
gacgtcactgcggtacgcccgcgcgacagcgaagcgcgtgcctacgacatcgtcgggccg
atctgcgagaccggcgacttcctcgccaaggaccgcgaactggccctggccgaaggtgat
ctgctggctgtgcactcggccggcgcttacggttttgtcatgagctcgaactacaacacc
cgtggccgtgccgctgaggtactggtcgacggttcccaggcttttgaagtgcgtcgtcgc
gaaaccgtggccgagctgttcgctggcgaaagcctgctgccggagtaa
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